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. 2020 May 14;117(22):12472–12480. doi: 10.1073/pnas.1914373117

Table 1.

Summary of the C. plumiforme genome assembly

Sequence and annotation
Sequencing and assembly
 Sequencing Insert libraries: 350bp ∼ 20 kb Illumina∼203× Pacbio RS II: ∼3.5× Total reads ∼90 Gb
 Assembly (scaffold) N50 size: 790.02 kb N90 size: 241.57 kb Longest: 3.38 Mb Total size: 335 Mb
Genome annotation
 Protein-coding gene Gene models: 32,195 Swiss-Prot hits: 12,342 BUSCO 93.9% Gene size: 2,948 bp
 Repetitive elements (%) LTR: 16.1 LINEs and SINEs: 0.96 DNA transposon: 3.98 Total: 49.17

LINE, long-interspersed retrotransposable element; LTR, long-terminal repeat; SINE, short-interspersed retrotransposable element.