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. 2019 Aug 27;28(21):3569–3583. doi: 10.1093/hmg/ddz207

Figure 4.

Figure 4

Genetic location distribution of SNVs called in single cells. All analysis results are for patient NA19098. (A) Number of SNVs in each genomic location called by GATK. (B) Number of SNVs in each genomic location called by Monovar. (C) Jaccard Index of overlap between single cell SNVs and True Bulk across all genomic locations. (D) Percentage of genotype concordance of overlapping SNVs between the single cell and True Bulk samples. (E) Percentage of single cells SNVs that overlap with gold standard. (F) Percentage of genotype concordance of overlapping SNVs between the single cell samples and the gold standard.