Table 2.
Summary of results from sequencing data for each of the four genotypes (before and after the clean-up phase).
| Genotype | duplicated sequences (%) | GC (%) | Length of sequences (bp) | Total sequences (M) | Coverage | Read Mapping (%) | ||||
|---|---|---|---|---|---|---|---|---|---|---|
| Pre-cleaning | final | Pre-cleaning | Final | Pre-cleaning | Final | Pre-cleaning | Final | |||
| Corno | 10.55% | 9.97% | 35.00% | 35.67% | 150 | 141.33 | 870.8 | 866.7 | 43.54 × | 99.10 |
| Cuneo | 8.28% | 8.19% | 35.00% | 35.00% | 150 | 141.3 | 775.2 | 763.8 | 38.76 × | 98.11 |
| Quadrato | 9.77% | 9.67% | 35.00% | 35.67% | 150 | 141.33 | 816 | 812.5 | 40.80 × | 99.07 |
| Tumaticot | 10.94% | 10.37% | 35.00% | 35.67% | 150 | 141.67 | 854.4 | 850.4 | 42.72 × | 99.08 |
| Total | — | — | — | — | — | — | 3316.4 | 3293.4 | — | — |
| Average | 9.88% | 9.55% | 35.00% | 35.75% | 150 | 141.41 | 829.1 | 823.35 | 41.46 × | 98.84 |