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. 2020 Jun 8;594(11):1651–1660. doi: 10.1002/1873-3468.13845

Table 1.

Bioinformatics analyses suggest the presence of glycoprotein‐binding proteins in members of the URT commensal bacteria. The proteins were identified using blast analysis, and the presence of secretory signal peptide was determined, with more than 98% probability, using SignalP‐5.0 server [41].

Lectin domain Bacteria Gene ID Localization
C‐type Gammaproteobacteria bacterium CMQ88_02965 Transmembrane
C‐type Gammaproteobacteria bacterium A9Q81_23845 Signal peptide (Sec/SPI)
C‐type Proteobacteria bacterium CMK59_07605 Lipoprotein signal peptide (Sec/SPII)
C‐type Rhodobacteraceae bacterium CML44_00865 Signal peptide (Sec/SPI)
Ricin B‐type Gammaproteobacteria bacterium DEQ32_10900 Signal peptide (Sec/SPI)
Ricin B‐type Alphaproteobacteria bacterium DEP10_04400 Signal peptide (Sec/SPI)
LegB Gammaproteobacteria bacterium CBC55_05095 Transmembrane

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