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. Author manuscript; available in PMC: 2020 Jun 9.
Published in final edited form as: J Neurovirol. 2018 Apr 23;24(4):439–453. doi: 10.1007/s13365-018-0633-5

Fig. 2. Distance-based clustering for SMRT HQCS at 3 genetic distance thresholds.

Fig. 2.

(a) Percent of all variants placed in any cluster (red bars, left axis) and the total number of clusters (blue bars, right axis) at three thresholds (x-axis). (b-d) The number of total Aligned reads (y-axis) in identified clusters (x-axis) at three thresholds. The tissue of origin is represented by colors as shown in the legend. Arrows above the bars indicate clusters with sequences from >1 tissue. For clarity only clusters with >=100 reads are shown