Table 3.
Equally abundant organisms (Coefficient of Variation, CV% < 10) in the analysed honey samples (HB9, HB12 and HB13).
| Class | Ranka | Organism | No. of annotated reads | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Read counts | clr-transformed read counts | ||||||||
| HB9 | HB12 | HB13 | HB9 | HB12 | HB13 | CV%b | |||
| Bacteria | species | Melissococcus plutonius | 105,867 | 100,269 | 159,306 | 2.3 | 2.5 | 2.3 | 4.7 |
| Bacteria | NA | Bifidobacterium asteroides DSM 20089 | 6 | 3 | 12 | −2.0 | −2.1 | −1.9 | 5.4 |
| Bacteria | species | Frischella perrara | 161,403 | 128,103 | 169,719 | 2.5 | 2.6 | 2.3 | 5.6 |
| Bacteria | species | Lactobacillus kunkeei | 13,121,714 | 15,232,526 | 11,376,580 | 4.4 | 4.6 | 4.1 | 5.9 |
| Bacteria | species | Gilliamella apicola | 370,547 | 174,546 | 260,828 | 2.8 | 2.7 | 2.5 | 6.3 |
| Bacteria | species | Acinetobacter sp. SWBY1 | 44 | 24 | 87 | −1.1 | −1.2 | −1.0 | 7.9 |
| Bacteria | species | Parasaccharibacter apium | 14,090 | 10,745 | 16033 | 1.4 | 1.5 | 1.3 | 7.9 |
| Bacteria | species | Erwinia gerundensis | 32 | 12 | 34 | −1.2 | −1.5 | −1.4 | 8.0 |
| Bacteria | NA | Lactobacillus kunkeei EFB6 | 927,869 | 1,160,989 | 755,840 | 3.2 | 3.5 | 2.9 | 9.0 |
| Bacteria | genus | Lactobacillus | 565,536 | 674,736 | 447,486 | 3.0 | 3.3 | 2.7 | 9.5 |
aLevel in the taxonomic hierarchy. NA indicates that the rank was not defined.
bSigned coefficient of variation based on the centered log-ratio (clr) transformed read counts.
Data are sorted by CV%.