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. 2020 Jun 10;9(1):39. doi: 10.1007/s13721-020-00243-w

Table 3.

Interaction and conservancy results of identified T-cell epitopes using tools for binding and conservancy analysis in IEDB

Epitope Interacting MHC-I allele (proteasome score, TAP score, MHC-I score and processing score) Epitope conservancy (%)
TSDLGQMEY

HLA-A*01:01(1.83) HLA-A*29:02(− 0.02)

HLA-B*35:01(0.19)

 86.58
FIDLLQAIY

HLA-A*01:01(1.26) HLA-A*29:02(0.88)

HLA-B*35:01(0.68) HLA-C*03:02(0.14)

 86.24
FSNNFSDIY

HLA-A*01:01(1.58) HLA-A*29:02(0.85)

HLA-B*15:01(0.46) HLA-B*35:01(1.12)

HLA-B*58:01(0.13) HLA-C*02:02(0.99)

HLA-C*03:02(1.27) HLA-C*12:02(0.83)

HLA-C*14:02(0.1) HLA-C*16:01(0.89)

 84.45
LSNTEGYRY

HLA-A*01:01(0.7) HLA-A*29:02(0.34)

HLA-B*58:01(0.28)

 89.71
LSWEMELAY

HLA-A*01:01(0.75) HLA-A*29:02(1.45)

HLA-B*15:01(0.7) HLA-B*35:01(1.58)

HLA-B*53:01(0.22) HLA-B*58:01(1.07)

HLA-C*03:02(1.21) HLA-C*16:01(0.69)

 91.95