Table 3.
Temperature (B-factor) and occupancy factor values in (Å2) for non-hydrogen atoms of methyl N-[5-[4-[[2-fluoro-5-(trifluoromethyl)phenyl]carbamoylamino]phenoxy]-1H-benzimidazol-2-yl]carbamate (PDB: GIG) (left panel) obtained from its X-ray cocrystal with VEGFR-2 (PDB: 2OH4) and methyl (6-{[6-(4-fluorophenyl)[1,2,4]triazolo [4,3-b]pyridazin-3-yl]sulfanyl}-1H-benzimidazol-2-yl)carbamate (PDB: 63B, 2 entries) (right panel) co-crystalized with Hepatocyte GFR (PDB: 5HNI). The 2D structures and atoms numbering can be viewed from Figure 8.
| Methyl N-[5-[4-[[2-fluoro-5-(trifluoromethyl)phenyl] carbamoylamino] phenoxy]-1H-benzimidazol-2-yl] carbamate |
Methyl (6-{[6-(4-fluorophenyl)[1,2,4] triazolo [4,3-b]pyridazin-3-yl]sulfanyl}-1H-benzimidazol-2-yl)carbamate |
||
|---|---|---|---|
| Atom Number | B-factor | Atom Number | B-factor |
| C36 | 50.45 | F | 38.29 |
| O35 | 46.86 | F | 37.08 |
| F3 | 46.26 | O2 | 36.90 |
| F4 | 46.20 | O1 | 36.83 |
| F11 | 44.51 | O1 | 36.41 |
| F1 | 44.16 | O2 | 36.07 |
| C2 | 43.44 | C17 | 35.62 |
| O34 | 43.38 | C17 | 35.19 |
| C33 | 43.01 | C20 | 34.98 |
| C9 | 42.46 | N4 | 34.80 |
| C10 | 42.27 | C14 | 34.78 |
| C8 | 41.43 | C14 | 34.75 |
| C5 | 41.36 | C15 | 34.58 |
| N32 | 41.36 | C2 | 34.18 |
| C6 | 41.35 | C19 | 34.13 |
| C7 | 41.10 | C19 | 33.95 |
| N26 | 39.89 | N3 | 33.94 |
| N12 | 39.74 | C10 | 33.84 |
| C21 | 39.71 | N1 | 33.60 |
| C24 | 39.67 | C20 | 33.59 |
| C17 | 39.63 | C11 | 33.40 |
| C20 | 39.44 | N2 | 33.36 |
| C19 | 39.30 | C7 | 33.22 |
| C13 | 39.17 | C1 | 33.16 |
| C16 | 39.11 | C15 | 33.13 |
| C23 | 38.72 | C3 | 33.11 |
| O22 | 38.65 | C4 | 33.08 |
| C31 | 38.63 | C6 | 32.89 |
| C18 | 38.62 | C10 | 32.88 |
| C30 | 38.56 | C7 | 31.76 |
| N15 | 38.31 | C11 | 31.73 |
| C25 | 38.15 | N4 | 31.47 |
| C27 | 37.52 | C4 | 30.88 |
| N28 | 36.65 | N3 | 30.76 |
| O14 | 36.58 | C2 | 30.68 |
| C29 | 36.28 | N7 | 30.51 |
| C1 | 30.36 | ||
| S1 | 30.26 | ||
| N1 | 30.21 | ||
| N2 | 30.06 | ||
| N7 | 29.69 | ||
| C6 | 29.60 | ||
| C3 | 29.41 | ||
| S1 | 28.48 | ||
| C5 | 27.38 | ||
| C8 | 26.47 | ||
| C5 | 26.31 | ||
| C18 | 25.76 | ||
| C8 | 24.61 | ||
| N5 | 24.42 | ||
| C9 | 24.41 | ||
| C12 | 24.24 | ||
| C18 | 24.07 | ||
| C9 | 23.78 | ||
| N6 | 23.70 | ||
| C16 | 23.66 | ||
| N5 | 23.54 | ||
| C12 | 23.01 | ||
| N6 | 22.99 | ||
| C13 | 22.94 | ||
| C13 | 22.89 | ||
| C16 | 22.54 | ||
| Average | 40.89 | 30.55 | |
| Occ. Factor | 1 | 1 | |