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. 2020 Jun 4:1–11. doi: 10.1080/07391102.2020.1773318

Table 6.

Identified important residues in nCoV S-protein RBD and their hydrogen bond interactions sustained during the 100 ns simulation run time.

MDS run time (ns) nCoV Spike protein RBD residues
10, 20, 30, 40, 50, 60, 70, 80, 90, 100 Gln 493
10, 20, 30, 40, 60, 70, 80, 90, 100 Gln 498
10, 20, 30, 40, 60, 80, 90, 100 Asn 487
20, 40, 50, 60, 70, 80, 90, 100 Tyr 505
30, 40, 50, 60, 70, 80, 90, 100 Lys 417
10, 20, 30, 70, 80, 90, 100 Thr 500
10, 20, 30, 40, 70, 100 Tyr 489
10, 20, 40, 70, 90, 100 Asn 501
40, 50, 60, 80, 90, 100 Tyr 453
20, 30, 50, 60, 80 Ala 475
20, 70, 90, 100 Leu 492
10, 20, 30 Gly 502
20, 40, 90 Phe 490
20, 30 Gly 496
60, 80 Glu 484
30 Gly 446
50 Arg 408, Tyr 449