Table 4.
CSP types identified to date among A. fumigatus isolates.
CSP | Codon | Tandem Repeat Succession | Codon |
---|---|---|---|
Type | −15 −14 −1 | +1 +2 +3 | |
t01 | GTG GTC CCG | 01-01-01-01-05-03-01-06-03-07 | CCA CCT |
t02 | GTG GTC CCG | 01-01-02-03-04-05-03-01-06-03-07 | CCA CCT |
t03 | GTG GTC CCG | 01-02-03-04-06-03-07 | CCA CCT |
t04A | GTG GTC CCG | 01-02-03-04-05-03-01-06-03-07 | CCA CCT |
t04B ** | GTG GTC CCA | 01-02-03-04-05-03-01-06-03-07 | CCA CCT |
t05 ** | GTG GTC CCG | 01-01-01-03-01-06-03-07 | CCA CCT |
t06A ** | GTG GTC CCG | 01-01-01-02-03-04-05-03-01-06-03-07 | CCA CCT |
t06B | GTG CTC CCG | 01-01-01-02-03-04-05-03-01-06-03-07 | CCG CCT CCT |
t07 ** | GTG CTC CCG | 01-02-03-04-05-03-04-05-03-01-06-03-07 | CCG CCT CCT |
t08 ** | GTG CTC CCG | 01-01-01-02-03-04-05-03-04-05-03-01-06-03-07 | CCG CCT CCT |
t09 ** | GTG GTC CCG | 01-01-01-01-01-05-03-01-06-03-07 | CCA CCT |
t10 | GTG GTC CCG | 01-01-01-05-03-01-06-03-07 | CCA CCT |
t11 ** | GCG CTC CCG | 01-01-08-03-01-06-03-07 | CCA CCT |
t12 ** | GTG GTC CCG | 01-01-01-01-01-02-03-04-05-03-01-06-03-07 | CCA CCT |
t13 | GTG CTC CCG | 01-01-02-03-04-05-03-04-05-03-01-06-03-07 | CCG CCT CCT |
t14 | GTG GTC CCG | 01-01-01-01-02-03-04-05-03-01-06-03-07 | CCA CCT |
t15 ** | GTG CTC CCG | 01-01-01-01-02-03-04-05-03-04-05-03-01-06-03-07 | CCG CCT CCT |
t16 ** | GTG GTC CCG | 01-05-03-01-06-03-07 | CCA CCT |
t17 ** | GTG GTC CCG | 01-01-02-03-04-05-03-09-06-03-07 | CCA CCT |
t18A ** | GTG GTC CCG | 01-01-05-03-01-06-03-07 | CCA CCT |
t18B ** | GCG CTC CCG | 01-01-05-03-01-06-03-07 | CCA CCT CCA |
t19 ** | GTG CTC CCG | 01-01-02-03-10-03-04-05-03-04-05-03-01-06-03-07 | CCG CCT CCT |
t20 ** | GTG GTC CCG | 01-02-03-07 | CCA CCT |
t21 ** | GTG GTC CCG | 01-02-03-04-04-03-07 | CCA CCT CCA |
t22 ** | GTG GTC CCG | 01-01-02-03-01-06-03-07 | CCA CCT CCA |
t23 ** | GTG GTC CCG | 01-01-02-03-04-05-03-07 | CCA CCT CCA |
t24 ** | GTG GTC CCG | 01-01-01-01-03-01-06-03-07 | CCA CCT CCA |
t25 * | GTG GTC CCG | 01-01-02-03-04-05-03-01-01-03-07 | CCA CCT |
t26 * | GTG GTC CCG | 01-06-03-07 | CCA CCT |