Table 2.
Amino acid composition of NtAQPs at known functionally important positions
| Gene Name | NPA I | NPA II | ar/R | Froger's positions | Other regulatory residues | Pred. subcellular loc. | |||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| LB | LE | H2 | LC | H5 | LE1 | LE2 | P1 | P2 | P3 | P4 | P5 | Asp28 | Glu31 | Ser115 | Ser188 | His193 | Ser274 | Ser277 | mPLoc | WolfPsort | Yloc | ||
| PIP | NtPIP1;1s | NPA | NPA | F | G | H | T | R | M | S | A | F | W | E | E | SP | N | H | - | S | plas | plas | cyto |
| NtPIP1;1t | NPA | NPA | F | G | H | T | R | M | S | A | F | W | E | E | SP | N | H | - | S | plas | plas | cyto | |
| NtPIP1;2s | NPA | NPA | F | G | H | T | R | Q | S | A | F | W | E | E | SP | N | H | - | S | plas | plas | cyto | |
| NtPIP1;2t | NPA | NPA | F | G | H | T | R | Q | S | A | F | W | E | E | SP | N | H | - | S | plas | plas | cyto | |
| NtPIP1;3s | NPA | NPA | F | G | H | T | R | M | S | A | F | W | E | E | SP | N | H | - | S | plas | plas | cyto | |
| NtPIP1;3t | NPA | NPA | F | G | H | T | R | M | S | A | F | W | E | E | SP | N | H | - | S | plas | plas | cyto | |
| NtPIP1;5s | NPA | NPA | F | G | H | T | R | M | S | A | F | W | E | E | SP | N | H | - | S | plas | plas | cyto | |
| NtPIP1;5t | NPA | NPA | F | G | H | T | R | M | S | A | F | W | E | E | SP | N | H | - | S | plas | plas | cyto | |
| NtPIP1;7t | NPA | NPA | F | G | H | T | R | G | S | A | F | W | E | E | SP | SP | H | - | S | plas | plas | cyto | |
| NtPIP1;8s | NPA | NPA | F | G | H | T | R | G | S | A | F | W | E | E | SP | SP | H | - | S | plas | plas | plas | |
| NtPIP2;1s | NPA | NPA | F | G | H | T | R | Q | S | A | F | W | D | E | SP | N | H | SP | S | plas | plas | plas | |
| NtPIP2;1x | NPA | NPA | F | G | H | T | R | Q | S | A | F | W | D | E | SP | N | H | SP | S | plas | plas | plas | |
| NtPIP2;2t | NPA | NPA | F | G | H | T | R | Q | S | A | F | W | D | E | SP | N | H | SP | S | plas | plas | plas | |
| NtPIP2;3t | NPA | NPA | F | G | H | T | R | Q | S | A | F | W | D | E | SP | N | H | SP | S | plas | plas | plas | |
| NtPIP2;4s | NPA | NPA | F | G | H | T | R | Q | S | A | F | W | D | E | SP | N | H | SP | S | plas | plas | plas | |
| NtPIP2;4t | NPA | NPA | F | G | H | T | R | Q | S | A | F | W | D | E | SP | N | H | SP | S | plas | plas | plas | |
| NtPIP2;5s | NPA | NPA | F | G | H | T | R | Q | S | A | F | W | D | E | SP | N | H | SP | S | plas | plas | plas | |
| NtPIP2;5t | NPA | NPA | F | G | H | T | R | Q | S | A | F | W | D | E | SP | N | H | SP | S | plas | plas | plas | |
| NtPIP2;6s | NPA | NPA | F | G | H | T | R | Q | S | A | F | W | D | E | SP | SP | H | SP | S | plas | plas | plas | |
| NtPIP2;6t | NPA | NPA | F | G | H | T | R | Q | S | A | F | W | D | E | SP | SP | H | SP | S | plas | plas | plas | |
| NtPIP2;7t | NPA | NPA | F | G | H | T | R | Q | S | A | F | W | D | E | SP | SP | H | SP | S | plas | plas | plas | |
| NtPIP2;8s | NPA | NPA | F | G | H | T | R | M | S | A | F | W | D | E | S | SP | H | SP | S | plas | plas | plas | |
| NtPIP2;8t | NPA | NPA | F | G | H | T | R | M | S | A | F | W | D | E | S | SP | H | SP | S | plas | plas | plas | |
| NtPIP2;9s | NPA | NPA | F | G | H | T | R | M | S | A | F | W | D | E | SP | SP | H | SP | S | plas | plas | plas | |
| NtPIP2;9t | NPA | NPA | F | G | H | T | R | M | S | A | F | W | D | E | SP | SP | H | SP | S | plas | plas | plas | |
| NtPIP2;11s | NPA | NPA | F | G | H | T | R | M | S | A | F | W | D | E | SP | N | H | SP | S | plas | plas | plas | |
| NtPIP2;11t | NPA | NPA | F | G | H | T | R | M | S | A | F | W | D | E | SP | N | H | SP | S | plas | plas | plas | |
| NtPIP2;13s | NPA | NPA | F | G | H | T | R | Q | S | A | F | W | D | E | SP | N | H | SP | SP | plas | plas | plas | |
| NtPIP2;13t | NPA | NPA | F | G | H | T | R | Q | S | A | F | W | D | E | SP | N | H | SP | SP | plas | plas | plas | |
| NIP | NtNIP1;1s | NPS | NPA | W | A | V | A | R | F | S | A | Y | L | - | - | P | - | - | SP | - | plas | plas | cyto |
| NtNIP1;2s | NPA | NPA | W | L | V | A | R | F | S | A | Y | M | - | - | P | - | - | S | - | plas | plas | plas | |
| NtNIP1;2t | NPA | NPA | W | L | V | A | R | F | S | A | Y | M | - | - | P | - | - | S | - | plas | plas | plas | |
| NtNIP2;1s | NPA | NPA | G | T | S | G | R | L | T | A | Y | I | - | - | P | - | - | SP | - | plas | plas | plas | |
| NtNIP3;1s | NPA | NPA | W | V | I | A | R | F | S | A | Y | I | - | - | P | - | - | S | - | plas | plas | plas | |
| NtNIP4;1s | NPA | NPA | W | F | V | A | R | F | S | A | Y | I | - | - | P | - | - | S | - | plas | plas | plas | |
| NtNIP4;1t | NPA | NPA | W | F | V | A | R | F | S | A | Y | I | - | - | P | - | - | S | - | plas | plas | plas | |
| NtNIP4;2s | NPA | NPA | W | F | V | A | R | L | S | A | Y | I | - | - | P | - | - | T | - | plas | plas | plas | |
| NtNIP4;2t | NPA | NPA | W | F | V | A | R | L | S | A | Y | I | - | - | P | - | - | T | - | plas | plas | plas | |
| NtNIP4;3s | NPA | NPA | W | F | V | A | R | L | S | A | Y | I | - | - | SP | - | - | S | - | plas | tono | plas | |
| NtNIP5;1s | NPA | NPA | S | V | I | A | R | F | T | A | Y | I | - | - | P | - | - | S | - | plas | tono | cyto | |
| NtNIP5;1t | NPS | NPV | A | V | I | A | R | F | T | A | Y | L | - | - | P | - | - | S | - | plas | tono | cyto | |
| NtNIP6;1s | NPA | NPV | S | V | I | A | R | L | T | A | Y | L | - | - | P | - | - | S | - | plas | plas | plas | |
| NtNIP6;1t | NPA | NPV | T | V | I | A | R | L | T | A | Y | L | - | - | P | - | - | S | - | plas | plas | plas | |
| NtNIP7;1s | NPA | NPA | A | I | V | G | R | Y | S | A | Y | V | - | - | P | - | - | T | - | plas | plas | plas | |
| NtNIP7;1t | NPA | NPA | A | I | V | G | R | Y | S | A | Y | V | - | - | P | - | - | T | - | plas | plas | plas | |
| TIP | NtTIP1;1s | NPA | NPA | H | F | I | A | V | A | S | A | Y | W | - | - | T | - | - | - | - | tono | plas | plas |
| NtTIP1;1t | NPA | NPA | H | F | I | A | V | A | S | A | Y | W | - | - | T | - | - | - | - | tono | plas | plas | |
| NtTIP1;2s | NPA | NPA | H | F | I | A | V | A | S | A | Y | W | - | - | T | - | - | - | - | tono | plas | pero | |
| NtTIP1;2t | NPA | NPA | H | F | I | A | V | A | S | A | Y | W | - | - | T | - | - | - | - | tono | plas | pero | |
| NtTIP1;3s | NPA | NPA | H | F | I | A | V | T | S | A | Y | W | - | - | T | - | - | - | - | tono | plas | plas | |
| NtTIP1;3t | NPA | NPA | H | F | I | A | V | T | S | A | Y | W | - | - | T | - | - | - | - | tono | plas | plas | |
| NtTIP1;4t | NPA | NPA | H | F | I | A | V | A | S | A | Y | W | - | - | T | - | - | - | - | tono | plas | cyto | |
| NtTIP2;1s | NPD | NPA | H | H | I | G | R | V | S | A | Y | W | - | - | T | - | - | - | - | tono | tono | plas | |
| NtTIP2;1t | NPA | NPA | H | H | I | G | R | V | S | A | Y | W | - | - | T | - | - | - | - | tono | plas | plas | |
| NtTIP2;2s | NPA | NPA | H | H | I | G | R | V | S | A | Y | W | - | - | T | - | - | - | - | tono | tono | plas | |
| NtTIP2;3s | NPA | NPA | H | H | I | G | R | V | S | A | Y | W | - | - | T | - | - | - | - | tono | tono | Extra | |
| NtTIP2;3t | NPA | NPA | H | H | I | G | R | V | S | A | Y | W | - | - | T | - | - | - | - | tono | tono | plas | |
| NtTIP2;4s | NPA | NPA | H | H | I | G | R | V | S | A | Y | W | - | - | T | - | - | - | - | tono | plas | plas | |
| NtTIP2;5s | NPA | NPA | H | H | I | G | R | V | S | A | Y | W | - | - | T | - | - | - | - | tono | plas | plas | |
| NtTIP2;5t | NPA | NPA | H | H | I | G | R | V | S | A | Y | W | - | - | T | - | - | - | - | tono | plas | plas | |
| NtTIP3;1s | NPA | NPA | H | F | I | A | R | A | A | A | Y | W | - | - | SP | - | - | - | - | tono | plas | plas | |
| NtTIP3;1t | NPA | NPA | H | F | I | A | R | A | A | A | Y | W | - | - | SP | - | - | - | - | tono | plas | plas | |
| NtTIP3;2t | NPA | NPA | H | F | V | G | R | A | A | A | Y | W | - | - | SP | - | - | - | - | tono | plas | plas | |
| NtTIP4;1s | NPA | NPA | H | H | I | A | R | V | S | A | Y | W | - | - | T | - | - | - | - | tono | tono | plas | |
| NtTIP4;1t | NPA | NPA | H | H | I | A | R | L | S | A | Y | W | - | - | T | - | - | - | - | tono | tono | plas | |
| NtTIP5;1s | NPA | NPA | N | H | V | G | Y | T | S | A | Y | W | - | - | S | - | - | - | - | tono | plas | plas | |
| NtTIP5;1t | NPA | NPA | N | H | V | G | Y | T | S | A | Y | W | - | - | S | - | - | - | - | plas, vac | plas | plas | |
| SIP | NtSIP1;1t | NPT | NPA | T | E | V | P | N | M | A | A | Y | W | - | - | H | - | - | - | - | plas | plas | Extra |
| NtSIP1;2s | NPA | NPA | T | G | V | P | N | I | A | A | Y | W | - | - | T | - | - | - | - | plas | tono | Extra | |
| NtSIP1;2t | NPA | NPA | T | G | V | P | N | I | A | A | Y | W | - | - | T | - | - | - | - | plas | tono | ER | |
| NtSIP2;1s | NPL | NPA | H | R | H | G | S | F | V | A | Y | W | - | - | S | - | - | - | - | plas | chlo | Extra | |
| NtSIP2;1t | NPL | NPA | H | R | H | G | S | F | V | A | Y | W | - | - | S | - | - | - | - | plas | chlo | Extra | |
| XIP | NtXIP1;6t | NPV | NPA | A | - | T | A | R | V | C | A | F | W | - | - | S | - | - | - | - | plas | plas | plas |
| NtXIP1;6s | NPV | NPA | A | - | T | A | R | V | C | A | F | W | - | - | S | - | - | - | - | plas | plas | plas | |
| NtXIP1;7s | NPV | NPA | I | - | T | A | R | V | C | A | F | W | - | - | S | - | - | - | - | plas | plas | pero | |
| NtXIP1;7t | NPV | NPA | I | - | T | A | R | V | C | A | F | W | - | - | S | - | - | - | - | plas | plas | pero | |
Amino acid composition of NtAQPs at known functionally important positions. Listed are the two NPA motifs (NPA I in Loop B, NPA II in Loop E), ar/R residues (in Helix 2, 5, Loop C and Loop E) and the Froger’s residues (Positions 1-5). Other known regulatory residues involved with post-translational regulation of AQPs are listed: Asp28, Glu31, Ser115, His131, His193, Ser274, Ser277. Amino acid positions of these sites are relative to Spinach PIP2;1 or Arabidposis TIP2;1 (LC - His131 residue), as their crystal structures have been defined and well-studied. Serine (S) residues with a superscript P (i.e. SP) are predicted to be phosphorylated according to NetPhos3.1. Also included are the predicted subcellular localisations from Plant-mPloc, WolfPsort and YLoc; outputs include plasma membrane (plas), cytosol (cyto), tonoplast (tono), chloroplast (chlo), endoplasmic reticulum (ER), peroxisome (pero) and extracellular (extra) localisation