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. Author manuscript; available in PMC: 2021 Jun 3.
Published in final edited form as: Neuron. 2020 Apr 8;106(5):743–758.e5. doi: 10.1016/j.neuron.2020.03.011

Figure 1. Single cell RNAseq analysis on mammalian habenula.

Figure 1.

A. Schematic of scRNAseq experiments. B. UMAP dimensional reduction and visualization of transcriptional profiles of 11,878 habenular cells. C. Top: dendrogram showing relationships between clusters. Middle: proportions of cells in each cluster. Bottom: violin plots showing levels of expression of canonical marker genes in neuronal and non-neuronal cells. D. Heat map showing scaled expression of all marker genes in each cell class (e.g. Neuron). Related to Figure S1.