Table 1.
AAvV-1 universal reverse transcription primers (AAvV-1uniRT) and amplification primers (AAvV-1final).
| Final primers | Sequence | From | To | Product |
|---|---|---|---|---|
| AAvV-1uni RT_1 | gactttgYgcaRgcgatgatg | 2427 | 2461 | |
| AAvV-1uni RT_2 | caaatgcYtctccYcaggtDgcYaagatac | 4207 | 4236 | |
| AAvV-1uni RT_3 | aaccaatgaRgctgtRcaYgaRgtcac | 5027 | 5053 | |
| AAvV-1uni RT_4 | acYcgRccaggtagtRtccc | 7757 | 7776 | |
| AAvV-1uni RT_5 | gcRgagcaYcagatYatcctacc | 8409 | 8431 | |
| AAvV-1uni RT_6 | gYcagaagctRtggacRatgatctc | 10,546 | 10,570 | |
| AAvV-1uni RT_7 | gaYggRtcacaccaRcttgc | 12,975 | 12,994 | |
| AAvV-1uni RT_8 | tatgcMtgtMgaggRgatatg | 14,223 | 14,243 | |
| AAvV-1final_IF | gccatgactgcRtatgagac | 656 | 675 | 3281 |
| AAvV-1final_IR | tcYacStccacatYaatagtgac | 3915 | 3937 | |
| AAvV-1final_IIF | agYctgtaYaatctYgcRctcaatgtcac | 3891 | 3947 | 3533 |
| AAvV-1final_IIR | ccctccRtaRactgRgaacc | 7353 | 7424 | |
| AAvV-1final_IIIF | gcYtgYatgtaYtcaaagac | 5652 | 5671 | 2851 |
| AAvV-1final_IIIR | agYggtagcccRgtYaatttcc | 8482 | 8503 | |
| AAvV-1final_IVF | ctMtaYtactggaaattRacYgggctacc | 8472 | 8500 | 3442 |
| AAvV-1final_IVR | tctatattgctYggRagatgRaacc | 11,890 | 11,914 | |
| AAvV-1final_VF | aacacYgtaatgtcYtgtgc | 10,905 | 10,924 | 3791 |
| AAvV-1final_VR | ctgYttRagtgatgtYctct | 14,677 | 14,696 |