Skip to main content
. 2020 May 25;11:446. doi: 10.3389/fpsyt.2020.00446

Table 3.

Genotype and allele frequencies of 10 SNPs in the DTNBP1 gene in SZ patients and HCs.

SNP# dbSNP ID Allele
(D/d)a
Stage SZ HCs p-value
nb HWE(p) Genotype MAF nb HWE(p) Genotype MAF
DD Dd dd DD Dd dd Genotype Allele
1 rs742106 A/G 1 528 0.73 153 266 109 0.46 528 0.60 192 248 88 0.40 0.02 (0.56)* 0.01(0.22)*
2 1,061 0.69 335 528 198 0.43 621 0.28 185 320 116 0.44 0.72 0.61
1&2 1,589 0.62 488 794 307 0.44 1,149 0.69 377 568 204 0.42 0.40 0.18
2 rs16876575 G/A 1 527 0.53 373 143 11 0.16 528 0.35 362 154 12 0.17 0.73 0.45
2 340 0.98 238 93 9 0.16 621 0.28 449 162 10 0.15 0.47 0.33
1&2 867 0.62 611 236 20 0.16 1,149 0.17 811 316 22 0.16 0.83 0.83
3 rs9464793 A/G 1 527 0.52 449 76 2 0.08 528 0.09 444 77 7 0.09 0.24 0.39
2 341 0.00 192 106 43 0.28 621 0.00 388 158 75 0.25 0.14 0.11
1&2 868 0.00 641 182 45 0.16 1,149 0.00 832 235 82 0.17 0.62 0.15
4 rs4712253 G/A 1 527 0.34 175 267 86 0.42 528 0.87 201 251 76 0.38 0.34 0.11
2 1,061 0.20 348 537 176 0.42 621 0.79 228 294 99 0.40 0.26 0.19
1&2 1,588 0.11 523 804 262 0.42 1,149 0.93 429 545 175 0.39 0.05 (0.80)* 0.03 (0.48)*
5 rs9370823 G/A 1 528 0.22 130 278 120 0.49 528 0.52 149 256 123 0.47 0.32 0.48
2 1,062 0.81 264 527 271 0.50 618 0.89 168 310 140 0.48 0.34 0.15
1&2 1,590 0.62 394 805 391 0.50 1,146 0.73 317 566 263 0.47 0.21 0.10
6 rs9358063 G/A 1 527 0.14 405 118 4 0.12 525 0.29 395 120 13 0.14 0.09 0.20
2 339 0.21 255 81 3 0.13 618 0.59 482 126 10 0.12 0.31 0.51
1&2 866 0.06 660 199 7 0.12 1,143 0.24 877 246 23 0.13 0.07 0.67
7 rs3829893 G/A 1 528 0.92 325 179 24 0.21 527 0.81 330 176 22 0.21 0.93 0.71
2 1,061 0.84 648 363 49 0.22 621 0.60 403 197 21 0.19 0.30 0.08
1&2 1,589 0.82 973 542 73 0.22 1,148 0.60 733 373 43 0.20 0.37 0.13
8 rs1011313 G/A 1 527 0.00 306 185 36 0.24 528 0.80 320 187 21 0.22 0.15 0.12
2 1,060 0.68 613 383 64 0.24 621 0.44 366 217 38 0.24 0.88 0.74
1&2 1,587 0.33 919 568 100 0.24 1,149 0.96 686 404 59 0.23 0.37 0.20
9 rs1047631 A/G 2 1,062 0.52 1,021 41 0 0.02 621 0.64 598 23 0 0.02 0.87 0.87
10 rs1997679 G/A 2 1,061 0.58 890 165 6 0.08 620 0.92 516 99 5 0.09 0.81 0.65

SZ, Schizophrenia; HCs, Health controls; MAF, Minor allele frequency; HWE, Hardy–Weinberg equilibrium; SNP, Single nucleotide polymorphism.

a

Major/minor allele, major and minor alleles are denoted by D and d, respectively.

b

Number of samples with well genotype.

*p value of Bonferroni correction.