Table 11.
The 80X mapped dataset.
DNA fragment length | Mapped coverage (X) | %1X | %5X | %10X | %20X | %30X | % PASS | % PASS RD > 10 | Fold enrichment | FOLD 80 penalty |
---|---|---|---|---|---|---|---|---|---|---|
200 | 80.72 | 99.86 | 99.82 | 99.71 | 98.42 | 95.21 | 95.55 | 95.45 | 43.50 | 1.53 |
230 | 80.00 | 99.86 | 99.81 | 99.65 | 97.94 | 94.22 | 95.52 | 95.36 | 45.67 | 1.58 |
260 | 79.99 | 99.81 | 99.73 | 99.68 | 99.54 | 99.13 | 96.38 | 96.34 | 35.13 | 1.34 |
270 | 79.97 | 99.79 | 99.72 | 99.67 | 99.54 | 99.13 | 96.40 | 96.37 | 34.72 | 1.34 |
280 | 80.00 | 99.79 | 99.71 | 99.65 | 99.48 | 99.01 | 96.43 | 96.38 | 33.79 | 1.36 |
290 | 80.02 | 99.80 | 99.71 | 99.65 | 99.49 | 99.01 | 96.43 | 96.38 | 33.10 | 1.36 |
340 | 79.99 | 99.84 | 99.78 | 99.71 | 99.50 | 98.88 | 96.53 | 96.47 | 31.59 | 1.37 |
360 | 79.96 | 99.84 | 99.78 | 99.70 | 99.08 | 97.11 | 96.58 | 96.51 | 33.52 | 1.42 |
400 | 80.05 | 99.84 | 99.78 | 99.69 | 98.93 | 96.66 | 96.58 | 96.50 | 32.17 | 1.45 |
For each DNA fragment length, the 80 mapped X-fold coverage is shown for the Twist target design dataset (mean of three independent experiments). The columns show the mapped coverage on the target, percentage of the target covered by at least 1, 5, 10, 20 and 30 reads, percentage of callable bases on the target for standard read depth (>3) and read depth >10, fold enrichment and FOLD 80 base penalty.