Table 2.
List of miRNAs differently modulated in GII + GIII vs GI CCCs.
| Mean GI | Mean GII + GIII | Log2FC (GII + GIII) vs GI | p-Value | FDR-BH | |
|---|---|---|---|---|---|
| hsa-miR-206 | 5.76 | 163.17 | 4.82 | 0.0452 | 0.56 |
| hsa-miR-31-3p | 3.71 | 47.59 | 3.68 | 0.0455 | 0.56 |
| hsa-miR-539-5p | 11.46 | 120.21 | 3.39 | 0.1733 | 0.80 |
| hsa-miR-382-5p | 42.82 | 392.61 | 3.20 | 0.2301 | 0.80 |
| hsa-miR-31-5p | 443.79 | 4027.37 | 3.18 | 0.0599 | 0.63 |
| hsa-miR-154-5p | 14.26 | 121.08 | 3.09 | 0.3019 | 0.80 |
| hsa-miR-335-5p | 69.42 | 563.24 | 3.02 | 0.0226 | 0.50 |
| hsa-miR-296-5p | 13.30 | 96.01 | 2.85 | 0.0039 | 0.19 |
| hsa-miR-337-5p | 29.08 | 202.89 | 2.80 | 0.1986 | 0.80 |
| hsa-miR-323b-3p | 13.86 | 95.72 | 2.79 | 0.2853 | 0.80 |
| hsa-miR-379-5p | 56.51 | 370.55 | 2.71 | 0.2880 | 0.80 |
| hsa-miR-133a-3p | 4.59 | 29.96 | 2.71 | 0.0210 | 0.50 |
| hsa-miR-487b-3p | 45.91 | 297.36 | 2.70 | 0.3172 | 0.80 |
| hsa-miR-127-3p | 34.01 | 214.65 | 2.66 | 0.3235 | 0.80 |
| hsa-miR-323a-3p | 20.00 | 121.45 | 2.60 | 0.3016 | 0.80 |
| hsa-miR-376a-5p | 19.63 | 116.84 | 2.57 | 0.3179 | 0.80 |
| hsa-miR-329-3p | 18.64 | 108.40 | 2.54 | 0.3207 | 0.80 |
| hsa-miR-134-5p | 65.72 | 367.31 | 2.48 | 0.4159 | 0.80 |
| hsa-miR-299-5p | 20.03 | 108.46 | 2.44 | 0.3034 | 0.80 |
| hsa-miR-337-3p | 55.00 | 284.17 | 2.37 | 0.3529 | 0.80 |
| hsa-miR-136-5p | 39.08 | 197.20 | 2.34 | 0.4154 | 0.80 |
| hsa-miR-409-3p | 112.71 | 545.22 | 2.27 | 0.3481 | 0.80 |
| hsa-miR-485-3p | 14.34 | 66.37 | 2.21 | 0.3792 | 0.80 |
| hsa-miR-369-5p | 12.70 | 52.10 | 2.04 | 0.4218 | 0.80 |
| hsa-miR-142-5p | 3066.08 | 762.90 | −2.01 | 0.0277 | 0.50 |
| hsa-miR-378c | 1792.81 | 431.96 | −2.05 | 0.0029 | 0.19 |
| hsa-miR-20b-5p | 397.40 | 89.68 | −2.15 | 0.0391 | 0.52 |
| hsa-miR-4284 | 142.31 | 30.78 | −2.21 | 0.0801 | 0.72 |
| hsa-miR-144-3p | 1469.84 | 312.46 | −2.23 | 0.0700 | 0.67 |
| hsa-miR-144-5p | 1064.99 | 219.75 | −2.28 | 0.0322 | 0.51 |
| hsa-miR-106a-5p | 78.37 | 16.17 | −2.28 | 0.0142 | 0.43 |
| hsa-miR-451a | 218299.38 | 36740.32 | −2.57 | 0.0179 | 0.46 |
| hsa-miR-146a-5p | 503.56 | 76.59 | −2.72 | 0.0039 | 0.19 |
| hsa-miR-489-3p | 495.25 | 27.07 | −4.19 | 0.0004 | 0.05 |
Mean of the normalized counts (CPM) for each group and log2 fold-change (log2FC) are reported. P-values and false discovery rate (corrected by Benjamini–Hochberg method, FDR-BH) were calculated by EdgeR exact test method. Significant FDR < 0.1.