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. 2020 Jun 10;10:9390. doi: 10.1038/s41598-020-66293-2

Figure 2.

Figure 2

Modelling of AlyA1 and Alg2A based on A1-II’ (2CWS) crystal structure. (A,B) Models of protein structures of AlyA1 and Alg2A, respectively. Loops involved in the interaction with the substrate are labeled in light blue. In dark blue we show the conserved residues in the cavity close to the putative active site. In red, non-conserved residues of the cavity. (C) ClustalW alignment of AlyA1 (WP_013992548.1), A1-II’ and Alg2A (AEB69783.1) protein sequences. Shadowed in dark blue are the residues that form the conserved substrate cavity and in red the important but non-conserved residues of this cavity. Loops important for substrate binding are labelled in light blue. Highly conserved regions described for PL7 family are marked with an asterisk. In bright pink, we show the unique aa sequences present in Alg2A or AlyA1 sequences.