TABLE 5.
List of the significant markers for coleoptile length.
| QTL Name | Marker | Chr† | Position (Mb) |
−LOG10(P) |
PVE (%) |
||||||
| MR1 | MR2 | MR3 | BLUP | MR1 | MR2 | MR3 | BLUP | ||||
| QCl.sicau-2A | B32929 | 2A | 764.66 | – | 6.03 | 5.18 | 6.07 | – | 4.10 | 3.57 | 4.17 |
| SNP3882 | 2A | 764.66 | 6.43 | 6.32 | 6.39 | 7.36 | 3.75 | 3.68 | 3.74 | 4.36 | |
| QCl.sicau-2B.1 | A30893 | 2B | 39.41 | 4.93 | – | – | – | 2.80 | – | – | – |
| QCl.sicau-2B.2 | A30968 | 2B | 47.85 | – | – | 4.96 | – | – | – | 2.97 | – |
| QCl.sicau-2D | SNP6484 | 2D | 651.77 | – | 5.23 | – | 5.01 | – | 2.96 | – | 2.82 |
| QCl.sicau-3A.1 | A48978 | 3A | 404.69 | – | 5.20 | – | – | – | 3.13 | – | – |
| SNP6783 | 3A | 404.69 | – | 4.87 | – | – | – | 2.73 | – | – | |
| QCl.sicau-3A.2 | SNP6979 | 3A | 700.22 | 5.28 | – | – | 5.13 | 3.00 | – | – | 2.90 |
| B11794 | 3A | 700.22 | 5.34 | – | – | 5.16 | 3.03 | – | – | 2.92 | |
| B11790 | 3A | 700.22 | 5.29 | – | – | 5.13 | 3.00 | – | – | 2.90 | |
| B11795 | 3A | 700.22 | 5.26 | – | – | 5.11 | 2.99 | – | – | 2.90 | |
| QCl.sicau-3B.1 | B10892 | 3B | 755.81 | 5.23 | 5.20 | – | 5.39 | 3.08 | 3.07 | – | 3.19 |
| B10891 | 3B | 755.81 | 4.85 | 4.82 | – | 5.00 | 2.83 | 2.82 | – | 2.94 | |
| SNP8235 | 3B | 755.81 | 5.44 | 5.34 | – | 5.58 | 3.10 | 3.04 | – | 3.19 | |
| QCl.sicau-3B.2 | SNP8294 | 3B | 770.47 | 5.32 | 5.67 | – | 5.76 | 3.02 | 3.25 | – | 3.31 |
| QCl.sicau-3B.3 | A11280 | 3B | 813.01 | – | – | 4.80 | – | – | – | 2.84 | – |
| QCl.sicau-4D.1 | A13215 | 4D | 319.09 | – | – | 4.92 | – | – | – | 2.99 | – |
| QCl.sicau-4D.2 | A39373 | 4D | 498.96 | – | 5.24 | – | – | – | 3.02 | – | – |
| QCl.sicau-5A | SNP11051 | 5A | 564.56 | – | 4.92 | – | 4.89 | – | 2.76 | – | 2.75 |
| B14507 | 5A | 564.56 | 5.02 | 5.17 | – | 5.13 | 2.86 | 2.94 | – | 2.92 | |
| SNP11058 | 5A | 566.55 | – | 4.92 | – | 4.89 | – | 2.76 | – | 2.75 | |
| QCl.sicau-6B.1 | A48008 | 6B | 168.77 | 5.85 | – | 5.00 | 5.50 | 3.52 | – | 3.04 | 3.32 |
| QCl.sicau-6B.2 | B18505 | 6B | 508.17 | 10.53 | 9.30 | 12.02 | 11.49 | 6.93 | 6.07 | 8.17 | 7.67 |
| A17510 | 6B | 508.17 | 6.44 | 5.36 | 6.19 | 6.42 | 3.85 | 3.10 | 3.71 | 3.82 | |
| SNP14693 | 6B | 508.17 | 7.54 | 6.54 | 7.74 | 7.75 | 4.48 | 3.82 | 4.63 | 4.62 | |
| B18506 | 6B | 509.26 | 7.97 | 7.94 | 10.19 | 9.33 | 5.08 | 5.09 | 6.80 | 6.09 | |
| QCl.sicau-6B.3 | SNP14819 | 6B | 628.06 | – | – | 5.07 | – | – | – | 2.88 | – |
| QCl.sicau-7A | A19567 | 7A | 536.82 | – | – | 4.77 | – | – | – | 2.76 | – |
| QCl.sicau-7D | A888 | 7D | 23.52 | – | – | – | 4.79 | – | – | – | 2.90 |
†Chr, chromosome; PVE, phenotypic variation explained; MR2, means of coleoptile length in repetition 2; MR3, means of coleoptile length in repetition 3; BLUP, best linear unbiased predictions.