TABLE 2.

Transposable elements in C. quinquecirrha genome.

Type	Repbase TEs		TE protiens		De novo		Combined TEs
	Length (bp)	Percentage in genome	Length (bp)	Percentage in genome	Length (bp)	Percentage in genome	Length (bp)	Percentage in genome
DNA	709,874	0.21	1,888,178	0.56	18,705,956	5.55	21,120,760	6.27
LINE	796,165	0.24	4,927,606	1.46	14,347,687	4.26	19,209,048	5.70
SINE	2,252	0.00	0	0.00	1,545,091	0.46	15,46,202	0.46
LTR	1,631,255	0.48	6,442,822	1.91	6,651,643	1.97	13,718,366	4.073
Other	8,929,221	2.65	394,266	0.12	13,124,857	3.90	15,697,233	4.66
UnKnown	37,621	0.01	0	0.00	69,551,725	20.65	69,589,343	20.66
Summary*	11,859,774	3.52	13,648,690	4.05	121,407,295	36.05	137,342,709	40.78

The summary* line shows the non-redundant transposable elements of the above six categories. The percentage number in this table was rounded with two decimal places.