Table 11.
List of single nucleotide polymorphisms (SNPs) identified in the TritryDB database, with information regarding the ancestral allele, polymorphic allele, allelic frequency, and amino acid position for each species and enzyme studied. The SNPs with the highest allelic frequencies are highlighted in bold.
| DHODH | |||||
|---|---|---|---|---|---|
| Species | ID TritryDB | Non-Synonymous SNP | Allele/Amino Acid | Allele Frequency | Protein Position |
| L. major | LMJSD75 16001070 | - | - | - | - |
| L. braziliensis | LbrM.16.0550 | A | G (Ala)/A (Thr) | 0.50/0.50 | 301 |
| T | T (Val)/C (Ala) | 0.75/0.25 | 205 | ||
| A | G (Gly)/A (Ser) | 0.50/0.50 | 6 | ||
| GPDH | |||||
| L. major | LmjF.10.0510 | C | G (Arg)/C (Pro) | 0.83/0.17 | 180 |
| L. braziliensis | LbrM.10.0640 | - | - | - | - |
| PTR1 | |||||
| L. major | LmjF.23.0270 | A | G (Gly)/A (Glu) | 0.60/0.40 | 25 |
| L. braziliensis | LbrM.23.0300 | - | - | - | - |
| TR | |||||
| L. major | LMJLV39 050008400 | - | - | - | - |
| L. braziliensis | LbrM.05.0350 | T | C (Ala)/T (Val) | 0.67/0.33 | 36 |
| G | A (Thr)/G (Ala) | 0.67/0.33 | 97 | ||
| G | A (Asp)/G (Gly) | 0.67/0.33 | 112 | ||
| G | A (Asn)/G (Ser) | 0.67/0.33 | 116 | ||
| C | G (Glu)/C (Asp) | 0.67/0.33 | 115 | ||
| G | A (Asn)/G (Ser) | 0.67/0.33 | 116 | ||
| A | C (Gln)/A (Lys) | 0.67/0.33 | 130 | ||
| A | A (Asn)/G (Leu) | 0.50/0.50 | 144 | ||
| C | G (Lys)/C (Asn) | 0.67/0.33 | 480 | ||
| UGPase | |||||
| L. major | LMJLV39 180015400 | - | - | - | - |
| L. braziliensis | LbrM.18.1050 | - | - | - | - |