Table 3. Genes with introns in Campomanesia xanthocarpa chloroplast genome and length of exons and introns.
Region | Gene | Exon I (bp) | Intron I (bp) | Exon II (bp) | Intron II (bp) | Exon III (bp) |
---|---|---|---|---|---|---|
LSC | rps16 | 206 | 889 | 38 | ||
LSC | rpoC1 | 1616 | 730 | 452 | ||
LSC | atpF | 410 | 747 | 146 | ||
LSC | petB | 5 | 772 | 647 | ||
LSC | petD | 8 | 753 | 473 | ||
LSC | rpl16 | 398 | 1005 | 8 | ||
LSC | ycf3 | 152 | 725 | 227 | 760 | 125 |
LSC | clpP | 227 | 620 | 290 | 871 | 68 |
LSC | trnK-UUU | 34 | 2530 | 36 | ||
LSC | trnG-UCC | 22 | 750 | 48 | ||
LSC | trnV-UAC | 36 | 595 | 38 | ||
LSC | trnL-UAA | 36 | 504 | 49 | ||
SSC | ndhA | 539 | 1061 | 551 | ||
LSC/IRs | rps12 * | 113 | – | 209 | – | 26 |
IR | rpl2 | 434 | 662 | 392 | ||
IR | ndhB | 755 | 695 | 776 | ||
IR | trnI-GAU | 36 | 956 | 33 | ||
IR | trnA-UGC | 37 | 804 | 34 |
rps12 is trans-spliced with the 5’-end located in the LSC region and the duplicated 3’-end in the IR regions