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. 2020 Jun 12;85:104419. doi: 10.1016/j.meegid.2020.104419

Table 2.

Summary of ligand-protein interaction sites in the pocket.

Drug Name Hydrogen Bonds Hydrophobic Interactions Carbon-hydrogen interactions Other interactions
Dactinomycin TYR1209,ASN953 PRO123, LYS278, LEU48, TRP1217, ILE1210 SER46, ASN280 ILE1210 (π-sigma)
Glycyrrhizic Acid LEU303, ASN824, THR827, GLN949, LEU1205, TYR1209, TRP1217 ALA956, LYS1205 VAL826 TRP-1217 (π-donor)
Eltrombopag VAL826, ALA829, LYS1205, TYR1209 LEU849, LEU1203, ILE1210, PRO1213
Azilsartan medoxomil THR827, GLN949, TRP1217 LEU945, ILE1210, PRO1213 ASN824, TRY1209
Bictegravir ASN824, LYS825, LYS1205, TYR1209,TRP1217 LEU849, LEU945, LEU1203, TRP1212, PRO1213 THR827 ASN1199 (π-anion)
Temsirolimus PHE823, ASN824, LYS825, THR827, ASN 953, TYR 1209, TRP1217 ALA956, ILE1210, PRO1213, TRP1217, TYR 1209 VAL826, THR307
Dolutegravir ASN824, LYS825, LYS1205, TYR1209, TRP1217 LEU849, LEU945, LEU1203, PRO1213 THR827 ASN1199 (π-anion)
Elbasvir ASN824, GLN949, ASN953, GLN957 LEU303, TYR313, LEU828, LEU849, TRP1212, PRO1213, TRP1217 THR827 TYR1209 (π-donor)
LYS825 (amide-π)
Irbesartan THR827, LYS1205, TYR1209, TRP1217 LYS1205, ILE1210, PRO1213
Gliquidone LYS1205, TYR1209, TRP1217 LEU849, LEU945, TRP1212, PRO1213 LEU828, TYR1209 TYR1209 (π‑sulfur)
Lanreotide ASN960, LYS964, ASP1199, LYS1205, TYR1209 LEU303, LYS304, LEU828, LEU1203 LYS1205 ALA952, ALA956 (π-sigma)
GLU309 (π-anion)
PHE833 (π-π)
Tasosartan GLU1195, TYR1209 LYS825, TYR1209, PRO1213, TRP1217 ASP1199 (π-anion)
LYS1205 (π-cation)
Velpatasvir ASN824, VAL826, GLN949, ASN960, LYS1205, TYR1209 LEU48, LYS304, LEU945, ILE1210 LEU303 LYS964 (π-cation)

The amino acids interacting with each drug and the interaction types are summarized.