Table 1.
Region | Size (Mb) | Observed | Expected | P value* |
---|---|---|---|---|
Alu | ||||
3′-UTR | 90.75 | 83 | 325 | 1E−11* |
5′-UTR | 21.02 | 15 | 75 | 1E−05* |
Coding | 41.94 | 12 | 150 | 1E−17* |
Intronic | 1,830.01 | 4,980 | 6,551 | 1E−15* |
Nongenic | 1,273.63 | 6,571 | 4,559 | 1E−23* |
Total | 3,257.35 | 11,661 | 11,661 | – |
LINE-1 | ||||
3′-UTR | 90.75 | 13 | 53 | 1E−07* |
5′-UTR | 21.02 | 2 | 12 | 1E−11* |
Coding | 41.94 | 0 | 24 | 1E−07* |
Intronic | 1,830.01 | 725 | 1,060 | 1E−12* |
Nongenic | 1,273.63 | 1,146 | 737 | 1E−44* |
Total | 3,257.35 | 1,886 | 1,886 | – |
SVA | ||||
3′-UTR | 90.75 | 5 | 13 | 0.0271 |
5′-UTR | 21.02 | 2 | 3 | 0.8500 |
Coding | 41.94 | 1 | 6 | 0.0425 |
Intronic | 1,830.01 | 216 | 267 | 0.0154 |
Nongenic | 1,273.63 | 251 | 186 | 0.0006* |
Total | 3,257.35 | 475 | 475 | – |
Significant at (Bonferroni-corrected) P < 0.05, Fisher’s exact test.