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. 2020 May 19;12(5):560. doi: 10.3390/v12050560

Table A4.

AUC and F1 metrics for all classifiers. All values are the mean over 5-fold stratified cross-validation, reported with standard deviation in brackets.

Model MLP BRNN CNN
AUC F1 AUC F1 AUC F1
ATV 0.899 [0.019] 0.765 [0.062] 0.980 [0.013] 0.865 [0.018] 0.981 [0.012] 0.866 [0.019]
DRV 0.872 [0.032] 0.815 [0.021] 0.960 [0.011] 0.915 [0.027] 0.987 [0.013] 0.910 [0.033]
FPV 0.934 [0.016] 0.830 [0.019] 0.945 [0.011] 0.925 [0.016] 0.937 [0.009] 0.922 [0.015]
IDV 0.928 [0.009] 0.831 [0.048] 0.988 [0.006] 0.928 [0.024] 0.979 [0.007] 0.925 [0.008]
LPV 0.926 [0.021] 0.829 [0.019] 0.975 [0.006] 0.944 [0.014] 0.973 [0.006] 0.948 [0.010]
NFV 0.906 [0.012] 0.809 [0.043] 0.979 [0.004] 0.894 [0.027] 0.976 [0.009] 0.891 [0.025]
SQV 0.897 [0.008] 0.523 [0.064] 0.976 [0.011] 0.630 [0.065] 0.981 [0.005] 0.673 [0.091]
TPV 0.842 [0.029] 0.669 [0.067] 0.916 [0.049] 0.782 [0.077] 0.93 [0.028] 0.831 [0.060]
PI AVERAGE 0.9 [0.009] 0.732 [0.135] 0.965 [0.014] 0.860 [0.106] 0.968 [0.007] 0.871 [0.088]
EFV 0.843 [0.033] 0.676 [0.043] 0.953 [0.017] 0.934 [0.021] 0.980 [0.007] 0.940 [0.013]
ETR 0.764 [0.032] 0.768 [0.034] 0.669 [0.049] 0.910 [0.067] 0.926 [0.023] 0.950 [0.016]
NVP 0.853 [0.022] 0.415 [0.209] 0.957 [0.062] 0.934 [0.021] 0.976 [0.008] 0.783 [0.044]
RPV 0.760 [0.037] 0.524 [0.139] 0.740 [0.062] 0.567 [0.102] 0.896 [0.032] 0.770 [0.126]
NNRTI AVERAGE 0.805 [0.006] 0.596 [0.157] 0.830 [0.021] 0.836 [0.180] 0.945 [0.012] 0.861 [0.097]
ABC 0.887 [0.025] 0.861 [0.031] 0.904 [0.026] 0.941 [0.103] 0.935 [0.007] 0.953 [0.010]
AZT 0.901 [0.025] 0.783 [0.017] 0.934 [0.012] 0.828 [0.028] 0.944 [0.012] 0.849 [0.009]
DDI 0.861 [0.081] 0.681 [0.100] 0.682 [0.053] 0.871 [0.009] 0.842 [0.047] 0.881 [0.027]
DFT 0.935 [0.025] 0.579 [0.050] 0.928 [0.057] 0.625 [0.083] 0.926 [0.013] 0.709 [0.051]
TDF 0.853 [0.044] 0.224 [0.107] 0.939 [0.027] 0.362 [0.116] 0.940 [0.034] 0.559 [0.095]
TTC 0.933 [0.017] 0.430 [0.096] 0.952 [0.010] 0.564 [0.100] 0.977 [0.013] 0.589 [0.119]
NRTI AVERAGE 0.895 [0.024] 0.593 [0.236] 0.89 [0.020] 0.698 [0.220] 0.927 [0.016] 0.757 [0.163]