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. 2020 May 11;48(11):5825–5838. doi: 10.1093/nar/gkaa345

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© The Author(s) 2020. Published by Oxford University Press on behalf of Nucleic Acids Research.

This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com

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Figure 2. — Water–nucleobase stacking contacts in three case studies. (A) 3D representation of 23S-5S rRNA from H. marismortui (95) with blue, green, red, and orange spheres representing adenine, guanine, uracil, cytosine bases involved in water–base interactions, respectively (left), and number of occurrences of bases involved in the interactions in different structural motifs (right). (B, C) 3D representation of HDV ribozyme (96) and THF riboswitch (97) highlighting the bases involved in water–base stacking contacts, the same bases are listed along with the structural motifs they are located in.