Table 1.
Upregulated regulatory genes of P. aeruginosa during infection
| mRNA level fold change (in vivo versus LB) | |||||
|---|---|---|---|---|---|
| Gene ID | Gene name | PAO1 RNAseq | PAO1 qPCR | PA14 qPCR | Description |
| PA0191 | 2.82 | 1.82 | 2.58 | transcriptional regulator | |
| PA0253 | 2.93 | 2.07 | 3.88 | transcriptional regulator | |
| PA0448 | 2.36 | 2.30 | 4.19 | transcriptional regulator | |
| PA0707 | toxR | 27.97 | 7.49 | 12.97 | transcriptional regulator ToxR |
| PA1179 | phoP | 9.36 | 3.9 | 24.5 | two-component response regulator PhoP |
| PA1713 | exsA | 11.46 | 9.10 | 20.35 | transcriptional regulator ExsA |
| PA2657 | 2.81 | 5.74 | 2.11 | two-component response regulator | |
| PA2798 | 3.31 | 3.21 | 2.10 | two-component response regulator | |
| PA2957 | 3.33 | 2.55 | 4.41 | transcriptional regulator | |
| PA3006 | psrA | 2.63 | 2.58 | 5.26 | transcriptional regulator PsrA |
| PA3604 | erdR | 2.79 | 5.21 | 2.02 | response regulator ErdR |
| PA3616 | recX | 2.92 | 3.11 | 4.71 | recombination regulator RecX |
| PA3932 | 5.44 | 1.57 | 1.80 | transcriptional regulator | |
| PA4381 | 2.39 | 3.83 | 1.73 | two-component response regulator | |
| PA4227 | pchR | 6.09 | 7.33 | 10.32 | transcriptional regulator PchR |
| PA4776 | pmrA | 3.44 | 14.05 | 8.68 | two-component regulator system response regulator PmrA |
| PA4853 | fis | 5.16 | 4.37 | 3.44 | Fis family transcriptional regulator |
| PA5117 | typA | 6.93 | 3.08 | 4.79 | regulatory protein TypA |
| PA5550 | glmR | 2.82 | 3.14 | 4.88 | GlmR transcriptional regulator |