Table 3.
Predicted nuclear localization (NLS) and nuclear export signals (NES) in W (3a) and V (3b) proteins of 21 APMV species.
| APMV species | Genbank ID | Predicted Nuclear localization signal sequence and position in W proteins | Predicted Nuclear export signal sequence and positionin W proteins |
|---|---|---|---|
| 3a: NLS and NES within W proteins | |||
| APMV -1 | FJ386394.2 | 138RAPKRGTTNVRLNSREVNPAAETVRKDRRTK168 |
210IPLYL214 (predicted by NetNES 1.1 Server); 105VDTQLRTGASNSLLL119,202SDQGRAKTIPLYLRI216, 203DQGRAKTIPLYLRIM217 (predicted by LocNES) |
| JQ015296.1 | 106DTQLKTGASNSLLSMLDKLSNKSSNAKKGAH136 | None predicted | |
| KX761866.1 | 106DTQLKTGASNSLLSMLDKLSNKSSNAKKGAH136 | 210ILLHLWIMSSYLSTL224 (predicted by LocNES) | |
| KT445901.1 | 138RAPKRGTTNVRLNSREVNPAAETVRKDRRTK168 |
210IPLYL214 (predicted by NetNES 1.1 Server); 105VDTQLRTGASNSLLL119, 202SDQGRAKTIPLYLRI216, 203DQGRAKTIPLYLRIM217 (predicted by LocNES) |
|
| AY562986.1 | 106DAQLKTGASNSLLSMLDKLSNKSPNTKKGAH136 |
13LEI15 (predicted by NetNES 1.1 Server); 1MATFTDAEIDDILEIn (predicted by LocNES) |
|
| APMV-6 | GQ406232.1 | 125RKLEKQGKSSGKTTADSSPGRDPSPSKKGARn | 13LELSSDVI20(predicted by NetNES 1.1 Server) |
| APMV-9 | EU910942.1 | 157RRRKTRHPADQPTHRDTAWSPERPPSCQSR186 |
12LMEQSGLVI20 (predicted by NetNES 1.1 Server 125KEGATGGLLDMLDRI139 (predicted by LocNES) |
| APMV-20 | MF033136.1 | 117KSNMGKDLDSALAKLEKKAASIKSDK142 (within N terminal region) | None predicted |
| 3b: NLS and NES within V proteins | |||
| APMV species | Genbank ID | Predicted Nuclear localization signal sequence and position in V proteins | Predicted Nuclear export signal sequence and positionin V proteins |
| APMV-5 | GU206351.1 | 197PTTKHTAKPNQDRLSNQKRHR217 | 4TDDQAILDLLTL-N |
| LC168750.1 | nPTTKHTAKSNQDRLSNQKRHR217 | 4TDDQAILDLLTL-N | |
| APMV-20 | 117KSNMGKDLDSALAKLEKKAASIKSDK142 (within N terminal region) | None predicted | |