Table 6.
Selection Pressure Analysis of V and W proteins of 21 APMV species.
| Species | V -complete dN/dS ratio | W -complete dN/dS ratio | P-V-W shared N terminal region dN/dS ratio | V -C terminal region dN/dS ratio | W -C terminal region dN/dS ratio |
|---|---|---|---|---|---|
| APMV-1 | 0.435 | 0.583 | 0.604 | 0.660 | 0.893 |
| APMV-2 | 0.637 | 0.115 | 0.459 | 0.000 | — |
| APMV-3 | 0.489 | 0.651 | 0.212 | 1.092 | 0.437 |
| APMV-4 | 0.327 | 0.776 | 0.636 | 0.987 | — |
| APMV-5 | 0.450 | 0.646 | 0.534 | 0.631 | 0.297 |
| APMV-6 | 0.513 | 0.600 | 0.582 | 0.935 | 0.000 |
| APMV-8 | 0.439 | 0.548 | 0.529 | — | — |
| APMV-10 | 0.388 | 0.684 | 0.534 | 0.00 | 0.00 |
| APMV-13 | 0.398 | 0.320 | 0.502 | 0.143 | 0.00 |
Species wise calculation of dN/dS ratios. Only those species comprising of more than one strain were included for the substitution calculation. The dN/dS ratio was estimated by DnaSP v6.12.0374. The dN/dS value was zero in those where the number of non-synonymous substitutions was zero and the dN/dS value could not be determined (−) in those where the number of synonymous substitutions were zero.