Table 1.
Number of samples that are distinguished by unsupervised hierarchical clustering in 7 cancer types.
| TCGA Cancer Type | Immune-deficient subtype (Subtype A) | Immune-competent subtype (Subtype B) | Non-cancer Controls | Total |
|---|---|---|---|---|
| Colon adenocarcinoma (COAD) | 264 | 216 | 41 | 521 |
| Glioblastoma multiforme (GBM) | 37 | 132 | 5 | 174 |
| Kidney renal papillary cell carcinoma (KIRP) | 172 | 117 | 32 | 321 |
| Pancreatic adenocarcinoma (PAAD) | 8 | 170 | 4 | 182 |
| Pheochromocytoma and paraganglioma (PCPG) | 164 | 19 | 3 | 186 |
| Sarcoma (SARC) | 29 | 234 | 2 | 265 |
| Skin cutaneous melanoma (SKCM) | 54 | 417 | 1 | 472 |
| Total | 728 | 1,305 | 88 | 2,121 |