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. Author manuscript; available in PMC: 2020 Sep 16.
Published in final edited form as: Nat Biotechnol. 2020 Mar 16;38(6):722–727. doi: 10.1038/s41587-020-0456-9
Feature %IncMSE IncNodePurity
Local Gmax probability 86.6814 47.9987
crRNA MFE 72.5480 69.6068
Unpaired probability 72.1078 57.5635
Local Cmin probability 56.9153 37.2137
hybridization MFE nt 15–23 54.5793 94.9857
Guide G nt probability 47.7324 29.2452
Guide CA di-nt probability 47.6241 21.4664
hybridization MFE nt 3–15 47.3083 46.7462
Guide CG di-nt probability 44.0711 11.7069
Guide AU di-nt probability 42.1128 15.6205
Guide CU di-nt probability 40.6967 16.9172
Guide A nt probability 39.7297 25.0736
Local GCmax probability 39.7236 59.0805
Local AUmin probability 38.8318 56.3599
Local Umax probability 38.7535 24.4657
Guide GG di-nt probability 38.5896 22.2621
Local Gmin probability 36.5244 19.6159
Guide UC di-nt probability 36.3043 15.2075
Guide AC di-nt probability 36.2901 14.2361
Guide C nt probability 36.0901 16.8637
Local Umin probability 35.6886 16.2571
Guide AG di-nt probability 34.9534 14.6260
Local Amin probability 34.6632 17.4928
Local Amax probability 33.6557 16.1888
Guide AA di-nt probability 33.2106 13.3830
Guide GC di-nt probability 33.0670 13.3209
Guide CC di-nt probability 32.2834 12.9797
Guide UG di-nt probability 31.9188 13.1659
Guide GU di-nt probability 31.8413 12.8934
Guide GA di-nt probability 31.3837 13.1399
Guide UA di-nt probability 30.6930 12.5052
Local Cmax probability 29.8186 14.2189
Local AUmax probability 22.4842 14.2585
Predicted correctly folded DR 8.2669 4.0679
Predicted G-quadruplex −3.0274 0.0219