Table 7. Overused genes in Flu Vaccination datasets.
Since the number of datasets in PRJNA324093 is much greater than in other projects, only genes that are overused in at least three different datasets are shown. The over-usage of a gene in a dataset is also shown. For example, the usage of IGHD1-1*01 in HA+ activated B cells for donor 1 is 3.7 times the maximum usage in all Healthy Human datasets.
| Gene | Cell type | Donor | Over-usage |
|---|---|---|---|
| IGHD1-1*01 | HA+ activated B cell | 1 | 3.7x |
| 5 |
13.5x | ||
| HA+ memory cells | 5.8x | ||
| HA- activated B cell | 7 |
2.4x | |
| HA- ASC | 4.3x | ||
| IGHD2-21*02 | HA+ activated B cell | 7 |
8.8x |
| 6.4x | |||
| HA+ ASC | 4.4x | ||
| IGHD3-22*01 | HA+ activated B cell | 4 |
2.2x |
| HA+ ASC | 3.4x | ||
| HA- activated B cell | 4.4x | ||
| HA+ memory B cell | 7 | 3.2x | |
| IGHD3-9*01 | HA+ activated B cell | 3 | 2.0x |
| HA- activated B cell |
6 | 2.2x | |
| 7 |
2.0x | ||
| HA- ASC | 2.1x | ||
| IGHD4-17*01 | HA+ activated B cell | 6 |
9.5x |
| 8.6x | |||
| 7 |
4.0x | ||
| 4.0x | |||
| HA+ ASC | 6 | 9.7x | |
| 7 | 6.7x | ||
| HA+ memory B cell | 6 | 7.2x |