Table 2.
Ka/Ks analysis and estimation of the absolute dates of the duplication events for the duplicated GST gene pairs from apple
Duplicate pair (Gene ID) | Duplicate pair (Gene name) | Duplicate type | Ka | Ks | Ka/Ks | Purifying selection | Duplicate dates (million years) |
---|---|---|---|---|---|---|---|
MD02G1236000–MD02G1236100 | MdGSTU15–MdGSTU16 | Tendem | 0.021 | 0.006 | 3.390 | No | 0.203 |
MD04G1139400–MD04G1139500 | MdGSTU13–MdGSTU8 | Tendem | 0.054 | 0.153 | 0.353 | Yes | 5.114 |
MD04G1139500–MD04G1139600 | MdGSTU8–MdGSTU14 | Tendem | 0.080 | 0.150 | 0.532 | Yes | 4.998 |
MD05G1184200–MD05G1184300 | MdGSTU7–MdGSTU5 | Tendem | 0.310 | 1.475 | 0.210 | Yes | 49.154 |
MD05G1184200–MD10G1172100 | MdGSTU7–MdGSTU6 | Segmental | 0.087 | 0.125 | 0.696 | Yes | 4.170 |
MD05G1184300–MD05G1184400 | MdGSTU5–MdGSTU3 | Tendem | 0.250 | 1.408 | 0.177 | Yes | 46.918 |
MD05G1210000–MD05G1210100 | MdGSTU33–MdGSTU30 | Tendem | 0.040 | 0.090 | 0.450 | Yes | 2.984 |
MD05G1210000–MD10G1196300 | MdGSTU33–MdGSTU24 | Segmental | 0.047 | 0.204 | 0.232 | Yes | 6.797 |
MD05G1210100–MD05G1210200 | MdGSTU30–MdGSTU31 | Tendem | 0.038 | 0.047 | 0.808 | Yes | 1.575 |
MD05G1210600–MD05G1210700 | MdGSTU29–MdGSTU25 | Tendem | 0.031 | 0.104 | 0.296 | Yes | 3.474 |
MD08G1244100–MD15G1438400 | MdDHAR2–MdDHAR1 | Segmental | 0.052 | 0.206 | 0.253 | Yes | 6.866 |
MD09G1147400–MD17G1133800 | MdGSTF4–MdGSTF1 | Segmental | 0.151 | 0.300 | 0.503 | Yes | 9.997 |
MD09G1279700–MD17G1286500 | MdGSTU27–MdGSTU23 | Segmental | 0.084 | 0.185 | 0.453 | Yes | 6.158 |
MD10G1172200–MD10G1172300 | MdGSTU2–MdGSTU4 | Tendem | 0.102 | 0.331 | 0.309 | Yes | 11.023 |
MD13G1081900–MD13G1082000 | MdGSTU17–MdGSTU18 | Tendem | 0.136 | 0.708 | 0.192 | Yes | 23.612 |
MD13G1081900–MD16G1081100 | MdGSTU17–MdGSTU11 | Segmental | 0.118 | 0.810 | 0.146 | Yes | 27.006 |
MD17G1134200–MD17G1134300 | MdGSTF5–MdGSTF14 | Tendem | 0.107 | 0.208 | 0.514 | Yes | 6.922 |