TABLE 1.
Assessment of completeness of the F. hygrometrica draft genome using Benchmarking Universal Single-Copy Orthologs (BUSCO).
| Complete |
Fragmented | Missing | |||
| Total | Single-copy | Duplicated | |||
| Embryophyta (n = 1614) | |||||
| F. hygrometrica | 1300(80.5%) | 1101(68.2%) | 199(12.3%) | 43(2.7%) | 271(16.8%) |
| M. polymorpha | 1412(87.5%) | 1385(85.8%) | 27(1.7%) | 20(1.2%) | 182(11.3%) |
| P. patens | 1423(88.1%) | 1174(72.7%) | 249(15.4%) | 28(1.7%) | 163(10.2%) |
| P. schreberi | 736(45.6%) | 540(33.5%) | 196(12.1%) | 278(17.2%) | 600(37.2%) |
| S. fallax | 1447(89.7%) | 1257(77.9%) | 190(11.8%) | 22(1.4%) | 145(8.9%) |
| Viridiplantae (n = 425) | |||||
| F. hygrometrica | 390(91.8%) | 336(79.1%) | 54(12.7%) | 7(1.6%) | 28(6.6%) |
| M. polymorpha | 411(96.7%) | 409(96.2%) | 2(0.5%) | 3(0.7%) | 11(2.6%) |
| P. patens | 416(97.8%) | 361(84.9%) | 55(12.9%) | 1(0.2%) | 8(2.0%) |
| P. schreberi | 227(53.4%) | 160(37.6%) | 67(15.8%) | 107(25.2%) | 91(21.4%) |
| S. fallax | 417(98.1%) | 375(88.2%) | 42(9.9%) | 2(0.5%) | 6(1.4%) |
For comparison, BUSCO statistics for the Marchantia polymorpha, Physcomitrium patens, Pleurozium schreberi, and Sphagnum fallax genomes are shown. Data was retrieved from Phytozome v12 (Goodstein et al., 2012) and analyzed using the Viridiplantae and Embryophyta BUSCO datasets obtained from OrthoDB v10.1.