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. Author manuscript; available in PMC: 2021 Jun 8.
Published in final edited form as: Dev Cell. 2020 May 14;53(5):503–513.e5. doi: 10.1016/j.devcel.2020.04.012

KEY RESOURCES TABLE

REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies
anti-mouse CD51 PE eBioscience Cat# 12-0512-83
anti-mouse CD140a APC eBioscience Cat# 17-1401-81
anti-mouse Ly-6A/E (Sca1) APC eBioscience Cat# 17-5981-83
anti-mouse Ly-6A/E (Sca1) PE-Cy7 eBioscience Cat# 25-5981-82
anti-mouse Ly-6A/E (Sca1) Alexa Fluor 700 eBioscience Cat# 56-5981-82
anti-mouse CD117 (c-Kit) BV 421 Biolegend Cat#105828
anti-mouse CD117 (c-Kit) PE-Cy7 Biolegend Cat#105814
anti-mouse CD48 biotin eBioscience Cat#13-0481-85
anti-mouse CD48 PerCP-eFluor 710 eBioscience Cat#46-0481-82
anti-mouse CD48 FITC eBioscience Cat#11-0481-82
anti-mouse CD41 APC eBioscience Cat#17-0411-82
anti-mouse CD41 FITC eBioscience Cat#11-0411-81
anti-mouse CD45.2 PE eBioscience Cat#12-0454-82
anti-mouse CD45.2 PerCP-Cy5.5 eBioscience Cat#45-0454-82
anti-mouse CD45.1 FITC eBioscience Cat#11-0453-85
anti-mouse CD45.1 APC eFluor 780 eBioscience Cat#47-0453-82
anti-mouse CD4 PE-Cy7 eBioscience Cat# 25-0041-82
anti-mouse CD8a PE-Cy7 eBioscience Cat# 25-0081-82
anti-mouse B220 APC eFluor 780 eBioscience Cat# 47-0452-82
anti-mouse CD11b Alexa Fluor 647 Biolegend Cat# 101218
anti-mouse CD31 Alexa Fluor 647 Biolegend Cat# 102516
anti-mouse CD144 Alexa Fluor 647 Biolegend Cat# 138006
anti-mouse Ki-67 eFluor 660 eBioscience Cat# 50-5698-82
anti-mouse CD34 PE Biolegend Cat# 119308
anti-mouse FcRII/III PerCP-eFluor 710 eBioscience Cat# 46-0161-82
anti-mouse CD150 PE Biolegend Cat# 115904
anti-mouse Ter119 PerCP-Cy5.5 eBioscience Cat# 45-5921-82
anti-mouse Lineage panel cocktail biotin BD Biosciences Cat# 559971
Streptavidin APC eFluor 780 eBioscience Cat# 47-4317-82
Streptavidin eFluor 450 eBioscience Cat# 48-4317-82
Streptavidin BV 570 Biolegend Cat# 405227
anti-mouse osteocalcin Takara Cat# R21C-01A
anti-perilipin Cell Signaling Cat# D1D8
Mouse Osteopontin (OPN) Affinity Purified Polyclonal Ab R&D Systems Cat# AF808
Chemicals, Peptides, and Recombinant Proteins
BODIPY 493/503 Molecular Probes Cat# D3922
5-Fluorouracil (5-FU) Sigma-Aldrich Cat# F6627
PolyI:C Invitrogen Cat# tlrl-pic
DAPI (4’,6-diamino-2-phenylindole) Sigma-Aldrich D9542
Hoechst 33342 Sigma-Aldrich B2261
Collagenase IV Gibco Cat# 17104-019
Dispase Gibco Cat# 17105-041
DNase I Sigma-Aldrich Cat# DN25
MesenCult stimulatory supplement StemCell Technologies 05502
Recombinant murine EGF PeproTech AF-315-09
Recombinant murine Oncostatin M (OSM) R&D Systems 495-MO-025
Recombinant human IGF-1 R&D Systems 291-G1-200
Recombinant murine PDGF-AA PeproTech 315-17
Recombinant human FGF-basic R&D Systems 233-FB-025
Chick Embryo Extract, Ultrafiltrate (CEE) 20ml USBiological C3999
Human Endothelial-SFM Gibco 11111-044
DMEM/F12, GlutaMAX Gibco 10565-018
Critical Commercial Assays
RNA to cDNA EcoDry™ Premix system Clontech 639546
Dynabeads® mRNA DIRECT™ Micro Kit Invitrogen 61012
Deposited Data
RNA-seq GSE142705 N/A
Oligonucleotides used for qRT-PCR
Gapdh-F: TGTGTCCGTCGTGGATCTGA Eurofins Genomics N/A
Gapdh-R: CCTGCTTCACCACCTTCTTGA Eurofins Genomics N/A
Snai2-F: TGGTCAAGAAACATTTCAACGCC Eurofins Genomics N/A
Snai2-R: GGTGAGGATCTCTGGTTTTGGTA Eurofins Genomics N/A
Cxcl12-F: TGCATCAGTGACGGTAAACCA Eurofins Genomics N/A
Cxcl12-R: CACAGTTTGGAGTGTTGAGGAT Eurofins Genomics N/A
Kitl-F: GAATCTCCGAAGAGGCCAGAA Eurofins Genomics N/A
Kitl-R: GCTGCAACAGGGGGTAACAT Eurofins Genomics N/A
Spp1-F: TCCCTCGATGTCATCCCTGTTG Eurofins Genomics N/A
Spp1-R: GGCACTCTCCTGGCTCTCTTTG Eurofins Genomics N/A
Angpt1-F: CTCGTCAGACATTCATCATCCAG Eurofins Genomics N/A
Angpt1-R: CACCTTCTTTAGTGCAAAGGCT Eurofins Genomics N/A
Il7-F: TTCCTCCACTGATCCTTGTTCT Eurofins Genomics N/A
Il7-R: AGCAGCTTCCTTTGTATCATCAC Eurofins Genomics N/A
Vcam1-F: GACCTGTTCCAGCGAGGGTCTA Eurofins Genomics N/A
Vcam1-R: CTTCCATCCTCATAGCAATTAAGGTG Eurofins Genomics N/A
Runx2-F: TTACCTACACCCCGCCAGTC Eurofins Genomics N/A
Runx2-R: TGCTGGTCTGGAAGGGTCC Eurofins Genomics N/A
Cdkn1a-F: CGAGAACGGTGGAACTTTGAC Eurofins Genomics N/A
Cdkn1a-R: CAGGGCTCAGGTAGACCTTG Eurofins Genomics N/A
Bbc3-F: CTACCTCTGCGCCCCCAC Eurofins Genomics N/A
Bbc3-R: CGACTCTAAGTGCTGCTGGG Eurofins Genomics N/A
Trp53-F: GCGTAAACGCTTCGAGATGTT Eurofins Genomics N/A
Trp53-R: TTTTTATGGCGGGAAGTAGACTG Eurofins Genomics N/A
Foxc1-F: CACTCGGTGCGGGAAATGT Eurofins Genomics N/A
Foxc1-R: GGTACAGAGACTGACTGGCA Eurofins Genomics N/A
Experimental Models: Organisms/Strains
C57BL/6-Gt(ROSA)26Sortm1(HBEGF)Awai/J The Jackson Laboratory RRID:IMSR_JAX:007900
B6; FVB-Tg(Cspg4-cre)1Akik/J The Jackson Laboratory RRID:IMSR_JAX:008538
B6.129-Leprtm2(cre)Rck/J The Jackson Laboratory RRID:MGI: 3776164
B6.Cg-Tg(Mx1-cre)1Cgn/J The Jackson Laboratory RRID:IMSR_JAX:003556
Spp1Tm1Blh/J The Jackson Laboratory JAX: 004936
C57BL/6 (CD45.2) National Cancer Institute
Bl6-Ly5.1 (CD45.1) The Jackson Laboratory JAX: 002014
Software and Algorithms
SlideBook Intelligent Imaging Innovations RRID:SCR_014300
FlowJo Tree Star RRID:SCR_008520
FACS Diva 6.1 BD Biosciences RRID:SCR_001456
Gene Set Enrichment Analysis Broad Institute RRID:SCR_003199
Ingenuity Pathway Analysis QIAGEN RRID:SCR_008653
GraphPad Prism GraphPad Software RRID:SCR_002798