Antibodies |
anti-mouse CD51 PE |
eBioscience |
Cat# 12-0512-83 |
anti-mouse CD140a APC |
eBioscience |
Cat# 17-1401-81 |
anti-mouse Ly-6A/E (Sca1) APC |
eBioscience |
Cat# 17-5981-83 |
anti-mouse Ly-6A/E (Sca1) PE-Cy7 |
eBioscience |
Cat# 25-5981-82 |
anti-mouse Ly-6A/E (Sca1) Alexa Fluor 700 |
eBioscience |
Cat# 56-5981-82 |
anti-mouse CD117 (c-Kit) BV 421 |
Biolegend |
Cat#105828 |
anti-mouse CD117 (c-Kit) PE-Cy7 |
Biolegend |
Cat#105814 |
anti-mouse CD48 biotin |
eBioscience |
Cat#13-0481-85 |
anti-mouse CD48 PerCP-eFluor 710 |
eBioscience |
Cat#46-0481-82 |
anti-mouse CD48 FITC |
eBioscience |
Cat#11-0481-82 |
anti-mouse CD41 APC |
eBioscience |
Cat#17-0411-82 |
anti-mouse CD41 FITC |
eBioscience |
Cat#11-0411-81 |
anti-mouse CD45.2 PE |
eBioscience |
Cat#12-0454-82 |
anti-mouse CD45.2 PerCP-Cy5.5 |
eBioscience |
Cat#45-0454-82 |
anti-mouse CD45.1 FITC |
eBioscience |
Cat#11-0453-85 |
anti-mouse CD45.1 APC eFluor 780 |
eBioscience |
Cat#47-0453-82 |
anti-mouse CD4 PE-Cy7 |
eBioscience |
Cat# 25-0041-82 |
anti-mouse CD8a PE-Cy7 |
eBioscience |
Cat# 25-0081-82 |
anti-mouse B220 APC eFluor 780 |
eBioscience |
Cat# 47-0452-82 |
anti-mouse CD11b Alexa Fluor 647 |
Biolegend |
Cat# 101218 |
anti-mouse CD31 Alexa Fluor 647 |
Biolegend |
Cat# 102516 |
anti-mouse CD144 Alexa Fluor 647 |
Biolegend |
Cat# 138006 |
anti-mouse Ki-67 eFluor 660 |
eBioscience |
Cat# 50-5698-82 |
anti-mouse CD34 PE |
Biolegend |
Cat# 119308 |
anti-mouse FcRII/III PerCP-eFluor 710 |
eBioscience |
Cat# 46-0161-82 |
anti-mouse CD150 PE |
Biolegend |
Cat# 115904 |
anti-mouse Ter119 PerCP-Cy5.5 |
eBioscience |
Cat# 45-5921-82 |
anti-mouse Lineage panel cocktail biotin |
BD Biosciences |
Cat# 559971 |
Streptavidin APC eFluor 780 |
eBioscience |
Cat# 47-4317-82 |
Streptavidin eFluor 450 |
eBioscience |
Cat# 48-4317-82 |
Streptavidin BV 570 |
Biolegend |
Cat# 405227 |
anti-mouse osteocalcin |
Takara |
Cat# R21C-01A |
anti-perilipin |
Cell Signaling |
Cat# D1D8 |
Mouse Osteopontin (OPN) Affinity Purified Polyclonal Ab |
R&D Systems |
Cat# AF808 |
Chemicals, Peptides, and Recombinant Proteins |
BODIPY 493/503 |
Molecular Probes |
Cat# D3922 |
5-Fluorouracil (5-FU) |
Sigma-Aldrich |
Cat# F6627 |
PolyI:C |
Invitrogen |
Cat# tlrl-pic |
DAPI (4’,6-diamino-2-phenylindole) |
Sigma-Aldrich |
D9542 |
Hoechst 33342 |
Sigma-Aldrich |
B2261 |
Collagenase IV |
Gibco |
Cat# 17104-019 |
Dispase |
Gibco |
Cat# 17105-041 |
DNase I |
Sigma-Aldrich |
Cat# DN25 |
MesenCult stimulatory supplement |
StemCell Technologies |
05502 |
Recombinant murine EGF |
PeproTech |
AF-315-09 |
Recombinant murine Oncostatin M (OSM) |
R&D Systems |
495-MO-025 |
Recombinant human IGF-1 |
R&D Systems |
291-G1-200 |
Recombinant murine PDGF-AA |
PeproTech |
315-17 |
Recombinant human FGF-basic |
R&D Systems |
233-FB-025 |
Chick Embryo Extract, Ultrafiltrate (CEE) 20ml |
USBiological |
C3999 |
Human Endothelial-SFM |
Gibco |
11111-044 |
DMEM/F12, GlutaMAX |
Gibco |
10565-018 |
Critical Commercial Assays |
RNA to cDNA EcoDry™ Premix system |
Clontech |
639546 |
Dynabeads® mRNA DIRECT™ Micro Kit |
Invitrogen |
61012 |
Deposited Data |
RNA-seq |
GSE142705 |
N/A |
Oligonucleotides used for qRT-PCR |
Gapdh-F: TGTGTCCGTCGTGGATCTGA |
Eurofins Genomics |
N/A |
Gapdh-R: CCTGCTTCACCACCTTCTTGA |
Eurofins Genomics |
N/A |
Snai2-F: TGGTCAAGAAACATTTCAACGCC |
Eurofins Genomics |
N/A |
Snai2-R: GGTGAGGATCTCTGGTTTTGGTA |
Eurofins Genomics |
N/A |
Cxcl12-F: TGCATCAGTGACGGTAAACCA |
Eurofins Genomics |
N/A |
Cxcl12-R: CACAGTTTGGAGTGTTGAGGAT |
Eurofins Genomics |
N/A |
Kitl-F: GAATCTCCGAAGAGGCCAGAA |
Eurofins Genomics |
N/A |
Kitl-R: GCTGCAACAGGGGGTAACAT |
Eurofins Genomics |
N/A |
Spp1-F: TCCCTCGATGTCATCCCTGTTG |
Eurofins Genomics |
N/A |
Spp1-R: GGCACTCTCCTGGCTCTCTTTG |
Eurofins Genomics |
N/A |
Angpt1-F: CTCGTCAGACATTCATCATCCAG |
Eurofins Genomics |
N/A |
Angpt1-R: CACCTTCTTTAGTGCAAAGGCT |
Eurofins Genomics |
N/A |
Il7-F: TTCCTCCACTGATCCTTGTTCT |
Eurofins Genomics |
N/A |
Il7-R: AGCAGCTTCCTTTGTATCATCAC |
Eurofins Genomics |
N/A |
Vcam1-F: GACCTGTTCCAGCGAGGGTCTA |
Eurofins Genomics |
N/A |
Vcam1-R: CTTCCATCCTCATAGCAATTAAGGTG |
Eurofins Genomics |
N/A |
Runx2-F: TTACCTACACCCCGCCAGTC |
Eurofins Genomics |
N/A |
Runx2-R: TGCTGGTCTGGAAGGGTCC |
Eurofins Genomics |
N/A |
Cdkn1a-F: CGAGAACGGTGGAACTTTGAC |
Eurofins Genomics |
N/A |
Cdkn1a-R: CAGGGCTCAGGTAGACCTTG |
Eurofins Genomics |
N/A |
Bbc3-F: CTACCTCTGCGCCCCCAC |
Eurofins Genomics |
N/A |
Bbc3-R: CGACTCTAAGTGCTGCTGGG |
Eurofins Genomics |
N/A |
Trp53-F: GCGTAAACGCTTCGAGATGTT |
Eurofins Genomics |
N/A |
Trp53-R: TTTTTATGGCGGGAAGTAGACTG |
Eurofins Genomics |
N/A |
Foxc1-F: CACTCGGTGCGGGAAATGT |
Eurofins Genomics |
N/A |
Foxc1-R: GGTACAGAGACTGACTGGCA |
Eurofins Genomics |
N/A |
Experimental Models: Organisms/Strains |
C57BL/6-Gt(ROSA)26Sortm1(HBEGF)Awai/J |
The Jackson Laboratory |
RRID:IMSR_JAX:007900 |
B6; FVB-Tg(Cspg4-cre)1Akik/J |
The Jackson Laboratory |
RRID:IMSR_JAX:008538 |
B6.129-Leprtm2(cre)Rck/J |
The Jackson Laboratory |
RRID:MGI: 3776164 |
B6.Cg-Tg(Mx1-cre)1Cgn/J |
The Jackson Laboratory |
RRID:IMSR_JAX:003556 |
Spp1Tm1Blh/J |
The Jackson Laboratory |
JAX: 004936 |
C57BL/6 (CD45.2) |
National Cancer Institute |
|
Bl6-Ly5.1 (CD45.1) |
The Jackson Laboratory |
JAX: 002014 |
Software and Algorithms |
SlideBook |
Intelligent Imaging Innovations |
RRID:SCR_014300 |
FlowJo |
Tree Star |
RRID:SCR_008520 |
FACS Diva 6.1 |
BD Biosciences |
RRID:SCR_001456 |
Gene Set Enrichment Analysis |
Broad Institute |
RRID:SCR_003199 |
Ingenuity Pathway Analysis |
QIAGEN |
RRID:SCR_008653 |
GraphPad Prism |
GraphPad Software |
RRID:SCR_002798 |