Table 2.

Error rate for A. kamchatica using quantified read counts, averaged across three samples each for A. halleri (H) and A. lyrata (L)

	Classification error
	H to L, %	L to H, %	Reads quantified
STAR	1.16	1.36	74149312
LAST	0.90	1.26	67015253
Kallisto	0.90	1.21	87667382
HomeoRoq	1.32	1.64	60946109
EAGLE-RC	0.54	0.80	57254486