Table 2.
Differentially expressed genes involved in TGF-β, proliferation, steroidogenesis, and apoptosis of chicken prehierarchical follicles (D580 vs. D280).
| Gene ID | log2FC | Gene symbol | Description |
|---|---|---|---|
| Upregulated genes | |||
| ENSGALG00000013510 | 0.34411 | UTP15 | U3 small nucleolar RNA-associated protein 15 |
| ENSGALG00000014355 | 0.30701 | STIM2 | Sterile alpha motif |
| ENSGALG00000012077 | 0.44187 | EDARADD | Death-like domain |
| ENSGALG00000015346 | 0.51732 | NFKBIZ | Ankyrin repeat-containing domain |
| ENSGALG00000015346 | 0.027157 | PARP9 | Poly (ADP-ribose) polymerase |
| ENSGALG00000016897 | 0.23546 | GPR180 | Transmembrane receptor |
| ENSGALG00000016951 | 0.30953 | MTRF1 | Peptide chain release factor |
| ENSGALG00000017186 | 0.13575 | BIRC2 | Death-like domain |
| ENSGALG00000003064 | 0.20476 | TADA1L | Histone fold |
| ENSGALG00000003914 | 0.064777 | CALR3 | Calreticulin/calnexin |
| Downregulated genes | |||
| ENSGALG00000010346 | -0.75224 | TGFB3 | Cystine-knot cytokine |
| ENSGALG00000006038 | -0.28909 | TGFBR3 | Zona pellucida domain |
| ENSGALG00000006319 | -0.48737 | TGFBI | FAS1 domain |
| ENSGALG00000003242 | -0.40236 | STAR | Steroidogenic acute regulatory protein-like |
| ENSGALG00000027798 | -0.21814 | CDK2 | Serine-threonine |
| ENSGALG00000001417 | -0.44788 | CYP11A1 | Cytochrome P450 |
| ENSGALG00000008459 | -0.245 | BMPR-II | Tyrosine-protein kinase |
| ENSGALG00000012216 | -0.41054 | BMPR1B | TGF-beta receptor |
| ENSGALG00000009365 | -0.25099 | CYP51A1 | Cytochrome P450 |
| ENSGALG00000025822 | -0.36166 | CYP1B1 | Cytochrome P450 |
| ENSGALG00000008121 | -0.36436 | CYP17A1 | Cytochrome P450 |
| ENSGALG00000013294 | -0.49038 | CYP19A1 | Cytochrome P450 |
| ENSGALG00000018639 | -0.60478 | Smad7a | MAD homology, MH1 |
| ENSGALG00000007870 | -0.3025 | SMAD3 | SMAD/FHA domain |
| ENSGALG00000000169 | -0.211 | PCNA | Proliferating cell nuclear antigen |