Table 2.
Top 10 transcription factor predictions of candidate genes.
| BRCA1 | BRIP1 | EREG | |||
|---|---|---|---|---|---|
| TF | Motif | TF | Motif | TF | Motif |
| RFX4 | GGTTTCCGTGGCAACG | NFYB | AGCTCGACCAATCAC | E2F6 | GGGCGGGAGCA |
| RFX5 | CGTTGCCACGGAAACC | TFDP1 | GGGCGGGAGGC | RXRG | GAGTGCACGGGCAGGGCG |
| RFX5 | GGTTTCCGTGGCAACG | CTCFL | GTCGAGGGGGCGGG | RARA | AGTGCACGGGCAGGGCG |
| RFX4 | CGTTGCCACGGAAACC | HAND1 | GGACTGGGGC | E2F6 | GGGAGGGAGGA |
| RFX2 | CGTTGCCACGGAAACC | SP2 | TTCCCGCCTCCCGCC | NR2F1 | GTGAGGTCAAGAG |
| RFX2 | GGTTTCCGTGGCAACG | CTCFL | GGACTGGGGCCGCC | NFYB | TCCCCGGCCAATCGG |
| SOX10 | CGGACAAAGAC | SP2 | CTCCCGCCCCCTCGA | MEIS2 | CTGACAGC |
| SOX3 | TCTTTGTCCG | TEAD2 | CCCCAGTCCTGCA | RUNX1 | CGCTGGGGCTT |
| SOX6 | TCTTTGTCCG | TFDP1 | AGGCGGGAATT | E2F4 | GGGCGGGAGCA |
| TFDP1 | GCGCGGGAATT | E2F6 | GGGCGGGAGGC | MAFG | GATGAC |
TF, transcription factor; motif, DNA sequence of target species which is predicted to be bound by the binding protein.