Table 3.

RNA-seq Data Mapping Statistics.

Brain	Group	Region	Total Reads	% Bases ≥ Q30	Mean Base Quality	Uniquely Mapped Reads	Mapping Rate	Median 5′ to 3′ Bias
1038	CTL	CCTX	22,666,185	77.09	31.71	18,508,346	81.66	2.16
1614	CTL	CCTX	20,406,028	76.18	31.42	13,966,751	68.44	0.76
4724	CTL	CCTX	17,775,778	76.21	31.45	12,903,748	72.59	0.51
4725	CTL	CCTX	17,152,400	76.58	31.57	13,787,313	80.38	1.36
6355	RTT	CCTX	16,799,774	76.38	31.49	11,754,027	69.96	0.71
7773	RTT	CCTX	22,119,416	77.01	31.70	17,627,391	79.69	1.36
7783	RTT	CCTX	32,207,239	77.16	31.72	22,511,241	69.89	0.43
B7992	RTT	CCTX	21,882,359	76.58	31.56	17,048,617	77.91	1.09
1038	CTL	TCTX (BA38)	23,689,678	77.72	31.88	16,671,042	70.37	1.34
1614	CTL	TCTX (BA36)	17,569,738	78.01	31.97	11,367,085	64.70	0.44
4724	CTL	TCTX (BA38)	22,429,527	77.84	31.93	15,519,596	69.19	0.98
4725	CTL	TCTX (BA38)	24,262,545	78.03	31.97	16,322,635	67.28	1.04
6355	RTT	TCTX	25,330,544	76.95	31.64	14,294,799	56.43	0.36
7773	RTT	TCTX	22,557,491	77.85	31.92	15,330,591	67.96	0.97
7783	RTT	TCTX	17,060,381	77.82	31.92	11,301,790	66.25	0.82
B7992	RTT	TCTX	26,211,057	77.11	31.70	16,434,103	62.70	1.01