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. 2020 Jun 19;10:9958. doi: 10.1038/s41598-020-66604-7

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© The Author(s) 2020

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Dissection of OsSTL1 for salt tolerance on chromosome 4. (a) Local Manhattan plot (upper) and LD heatmap (lower) surrounding the lead SNP for STL on chromosome 4. Red dots represent all SNPs within OsSTL1. (b) Different haplotypes of OsSTL1 in indica and japonica. The red number identifies the nonsynonymous mutation; red arrow shows the functional site. (c) Comparison of the STL trait for salt tolerance among OsSTL1 haplotypes in indica and japonica using one-way ANOVA. Green violins represent indica and red violins represent japonica. Different letters indicate significant differences (p < 0.01) detected by one-way ANOVA.