Table 3.

Statistics of repeat elements in the Tarim red deer genome.

	De novo		Repbase TEs		TE Proteins		Combined TEs
	Length (bp)	% in Genome	Length (bp)	% in Genome	Length (bp)	% in Genome	Length (bp)	% in Genome
DNA	765,397	0.03	26,322,675	1.01	655,292	0.25	26,729,330	1.03
LINE	855,277,270	32.94	640,898,202	24.68	423,761,737	16.32	980,437,996	37.76
SINE	281,327	0.01	109,276,352	4.21	0	0.00	109,493,480	4.22
LTR	247,139,539	9.52	73,669,154	2.84	7,252,671	0.28	303,709,517	11.70
Other	0	0.00	192	0.00	444	0.00	636	0.00
Unknown	3,083,692	0.12	0	0.00	0	0.00	3,083,692	0.12
Total	988,599,789	38.07	836,426,458	32.21	431,640,750	16.62	1,086,749,836	41.85