Table 4.
The statistics of gene models of protein-coding genes annotated in the Tarim red deer genome.
Methods | Gene set | Number of genes | Average length (bp) | Exons per gene | |||
---|---|---|---|---|---|---|---|
Gene length | CDS length | Exon length | Intron length | ||||
Ab initio | Augustus | 25,176 | 44,593.56 | 1,427.27 | 175.37 | 6,046.70 | 8.14 |
Homolog | Bos taurus | 26,515 | 23,126.00 | 1,524.78 | 181.24 | 2,913.94 | 8.41 |
Canis familiaris | 28,410 | 40,491.39 | 1,575.50 | 180.72 | 5,042.44 | 8.72 | |
Homo sapiens | 102,682 | 31,718.82 | 1,081.93 | 165.30 | 5,525.07 | 6.55 | |
Ovis aries | 27,407 | 33,288.38 | 1,459.59 | 179.88 | 4,474.00 | 8.11 | |
Sus scrofa | 29,486 | 23,673.50 | 1,267.90 | 184.48 | 3,815.11 | 6.87 | |
Balaenoptera acutorostrata | 36,502 | 47,716.59 | 1,749.88 | 168.55 | 4,899.43 | 10.38 | |
Glean | 20,652 | 37,290.72 | 1,577.53 | 190.74 | 4,912.07 | 8.54 |