REAGENT or RESOURCE	SOURCE	IDENTIFIER
Deposited Data
Coronavirus (incl. SARS-CoV-2) genome sequences	NCBI GenBank	Various (see query strings in covid19/baseline.py and covid19/covid19.py source code files in GitHub repository)
Human cytomegalovirus genome sequence	NCBI GenBank	NC_006273.2
APEX-seq RNA localization data	Fazal et al., 2019	GEO: GSE116008
RNA binding protein motif database	Ray et al., 2013	MEME Motif Databases
seqFISH data	Fazal et al., 2019	Derived from Figure 2, PMID 31230715
Software and Algorithms
RNA-GPS model and SARS-CoV-2 analysis code	This manuscript and Wu et al., 2020b	https://github.com/wukevin/rnagps