Table 2. Potential tertiary interactions in the mitochondrial tRNAs, tRNATrp, tRNALys and tRNALeu(CUN) of Caretta caretta.
| Interaction number | 1 | 2 | 3 | 4 | 5 | 6 | 7 |
|---|---|---|---|---|---|---|---|
| Nucleotide positions | 15–48 | (8–14)–21 | (13–22)–46 | 9–(23–12) | 24–11 | (25–10)–45 | 26–44 |
| 1Canonical | R–Y | (A–U)–A | (N–N)–R | R–(R–Y) | N–N | (N–N)–N | R–R |
| Trp | A–C* | (U–U)–A* | (U–A)–A* | A–(A•A) | C–G | (C–G)–A | A–A |
| Lys | A–A | (A–A)–A* | (A–U)–A | A–(A–U) | G–C | (C–G)–A | G–A |
| LeuCUN | G–C* | (A–A)–A* | (U–A)–A* | A–(U–A) | C–G | (C–G)–A | A–G |
Notes:
Italics letters, nucleotides that do not match with those reported for the same interaction in canonical tRNA.
• Non-canonical pair identified in the 2D structure.
, Interaction partially supported in the tertiary structure.
R, Purines; Y, Pyrimidine; N, any nucleotide.