Table 2.
List of primers used for PCR amplification of resistant genes.
| Gene | Oligonucleotide sequence | Fragment size (bp) | Location | References |
|---|---|---|---|---|
| 16SrRNA | F: 5′TTT AAG CGA GGA GGA GG3′ R: 5′ATT CTA CCA TCC TCT CCC3′ |
240 | 16SrRNA | [20] |
| OXA-23-like | F: 5′GATCGGATTGGAGAACCAGA3′ R: 5′ATTTCTGACCGCATTTCCAT3′ |
501 | bla OXA-23 | [21] |
| OXA-24-like | F: 5′GGTTAGTTG GCC CCC TTA AA3′ R: 5′AGTTGAGCGAAAAGGGGATT3′ |
246 | bla OXA-24 | [21] |
| OXA-51-like | F: 5′TAATGCTTT GATCGG CCT TG3′ R: 5′TGGATTGCACTT CAT CTT GG3′ |
353 | bla OXA-51 | [21] |
| OXA-58-like | F: 5′AAGTATTGGGGCTTGTGCTG-3′ R: 5′CCCCTCTGCGCTCTACATAC3′ |
599 | bla OXA-58 | [21] |
| IMP-1 | F: 5′GATGGTATGGTGGCTCTTGT3′ R: 5′TTAATTTGCCGGACTTAGGC3′ |
448 | Bla IMP | [22] |
| NDM-1 | F: 5′ATTAGCCGCTGCATTGAT3′ R: 5′CATGTCGAGATAGGAAGTG3′ |
154 | bla NDM | [23] |
| VIM-like | F: 5′ACTCACCCCCATGGAGTTTT3′ R: 5′ACGACTGAGCGATTTGTGTG3′ |
815 | bla VIM | [24] |
| SIM-1-like | F: 5′TAATGCTTT GATCGG CCT TG3′ R: 5′TGGATTGCACTT CAT CTT GG3′ |
353 | bla SIM | [21] |
| AmpC | F: ACAGAGGAGCTAATCATGCG R: GTTCTTTTAAACCATATACC |
1243 | bla AmpC | [25] |
| ISAba1 | F: 5-CACGAATGCAGAAGTTG-3 R: 5-CGACGAATACTATGACAC-3 |
599 | ISAba1 | [18] |
| intI1 | F: 5′CAG TGG ACA TAA GCC TGT TC3′ R: 5′CCC GAC GCA TAG ACT GTA3′ |
160 | Integrase gene | [19] |