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. 2020 Feb 14;33(3):769–781. doi: 10.1021/acs.chemrestox.9b00389

Table 2. Comparison of SCRF-PCM and LD Activation Free Energies for BPL Alkylation of Methylated Nucleobases.

  guanined (kcal/mol) adenine(kcal/mol) cytosine(kcal/mol) thymine(kcal/mol)
method/basis set ΔGgasa ΔGSCRFb ΔGLDc ΔGgasa ΔGSCRFb ΔGLDc ΔGgasa ΔGSCRFb ΔGLDc ΔGgasa ΔGSCRFb ΔGLDc
AM1 51.86     51.68     52.98     66.96    
PM3 52.17     54.29     56.03     94.60    
HF/6-31 G(d) 45.10 25.30 15.56 47.14 29.62 22.71 49.18 27.74 19.29 71.71 47.52 41.51
HF/6-31+ G(d,p) 42.72 22.06 11.83 44.72 26.42 19.16 46.84 24.53 13.14 66.91 41.82 34.01
HF/6-311++ G(d,p) 43.31 22.45 12.06 45.12 26.98 19.54 47.11 25.15 13.87 67.16 42.61 34.25
MP2/6-31 G(d) 44.12 19.81 16.78 46.75 25.68 21.97 49.74 24.47 17.09 72.23 42.32 40.25
MP2/6-31+ G(d,p) 42.08 15.49 11.69 44.10 21.53 17.58 47.29 20.08 12.36 66.98 34.91 33.09
MP2/6-311++ G(d,p) 42.81 21.96 10.69 44.23 23.16 18.29 47.88 21.76 13.73 67.61 35.84 34.69
M06-2X/6-31 G(d) 42.63 25.65 14.05 42.26 26.98 19.26 45.74 26.76 17.46 64.34 43.51 37.05
M06-2X/6-31+ G(d,p) 39.98 20.36 8.26 39.28 23.54 15.24 42.94 23.18 12.37 59.54 37.96 29.66
M06-2X/6-311++ G(d,p) 40.14 20.75 8.34 39.08 23.33 15.01 42.58 23.08 12.53 59.58 38.35 28.62
mPWPW91/6-31 G(d) 40.53 22.01 12.03 41.10 25.60 18.07 44.15 24.69 15.25 64.52 44.77 36.33
mPWPW91/6-31+ G(d,p) 38.06 18.99 6.75 38.43 22.53 13.71 41.65 21.44 10.49 59.89 39.33 29.05
mPWPW91/6-311++ G(d,p) 38.20 19.22 7.20 38.27 22.53 14.00 41.37 21.43 10.31 59.76 39.61 27.97
a

The gas-phase activation energy of the alkylation reaction of a specific methylated nucleobase with β-propiolactone.

b

Activation free energies of the alkylation reaction between a specific methylated nucleobase and β-propiolactone obtained by the SCRF-PCM method.

c

Activation free energies of the alkylation reaction between a specific methylated nucleobase and β-propiolactone obtained by the LD method.

d

Experimental value: ΔG = 20.8 ± 0.5 kcal/mol.