Table 2. Comparison of SCRF-PCM and LD Activation Free Energies for BPL Alkylation of Methylated Nucleobases.
| guanined (kcal/mol) | adenine(kcal/mol) | cytosine(kcal/mol) | thymine(kcal/mol) | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| method/basis set | ΔGgas⧧a | ΔGSCRF⧧b | ΔGLD⧧c | ΔGgas⧧a | ΔGSCRF⧧b | ΔGLD⧧c | ΔGgas⧧a | ΔGSCRF⧧b | ΔGLD⧧c | ΔGgas⧧a | ΔGSCRF⧧b | ΔGLD⧧c |
| AM1 | 51.86 | 51.68 | 52.98 | 66.96 | ||||||||
| PM3 | 52.17 | 54.29 | 56.03 | 94.60 | ||||||||
| HF/6-31 G(d) | 45.10 | 25.30 | 15.56 | 47.14 | 29.62 | 22.71 | 49.18 | 27.74 | 19.29 | 71.71 | 47.52 | 41.51 |
| HF/6-31+ G(d,p) | 42.72 | 22.06 | 11.83 | 44.72 | 26.42 | 19.16 | 46.84 | 24.53 | 13.14 | 66.91 | 41.82 | 34.01 |
| HF/6-311++ G(d,p) | 43.31 | 22.45 | 12.06 | 45.12 | 26.98 | 19.54 | 47.11 | 25.15 | 13.87 | 67.16 | 42.61 | 34.25 |
| MP2/6-31 G(d) | 44.12 | 19.81 | 16.78 | 46.75 | 25.68 | 21.97 | 49.74 | 24.47 | 17.09 | 72.23 | 42.32 | 40.25 |
| MP2/6-31+ G(d,p) | 42.08 | 15.49 | 11.69 | 44.10 | 21.53 | 17.58 | 47.29 | 20.08 | 12.36 | 66.98 | 34.91 | 33.09 |
| MP2/6-311++ G(d,p) | 42.81 | 21.96 | 10.69 | 44.23 | 23.16 | 18.29 | 47.88 | 21.76 | 13.73 | 67.61 | 35.84 | 34.69 |
| M06-2X/6-31 G(d) | 42.63 | 25.65 | 14.05 | 42.26 | 26.98 | 19.26 | 45.74 | 26.76 | 17.46 | 64.34 | 43.51 | 37.05 |
| M06-2X/6-31+ G(d,p) | 39.98 | 20.36 | 8.26 | 39.28 | 23.54 | 15.24 | 42.94 | 23.18 | 12.37 | 59.54 | 37.96 | 29.66 |
| M06-2X/6-311++ G(d,p) | 40.14 | 20.75 | 8.34 | 39.08 | 23.33 | 15.01 | 42.58 | 23.08 | 12.53 | 59.58 | 38.35 | 28.62 |
| mPWPW91/6-31 G(d) | 40.53 | 22.01 | 12.03 | 41.10 | 25.60 | 18.07 | 44.15 | 24.69 | 15.25 | 64.52 | 44.77 | 36.33 |
| mPWPW91/6-31+ G(d,p) | 38.06 | 18.99 | 6.75 | 38.43 | 22.53 | 13.71 | 41.65 | 21.44 | 10.49 | 59.89 | 39.33 | 29.05 |
| mPWPW91/6-311++ G(d,p) | 38.20 | 19.22 | 7.20 | 38.27 | 22.53 | 14.00 | 41.37 | 21.43 | 10.31 | 59.76 | 39.61 | 27.97 |
The gas-phase activation energy of the alkylation reaction of a specific methylated nucleobase with β-propiolactone.
Activation free energies of the alkylation reaction between a specific methylated nucleobase and β-propiolactone obtained by the SCRF-PCM method.
Activation free energies of the alkylation reaction between a specific methylated nucleobase and β-propiolactone obtained by the LD method.
Experimental value: ΔG⧧ = 20.8 ± 0.5 kcal/mol.