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. 2020 May 15;9(6):1361–1375. doi: 10.1021/acssynbio.0c00045

Table 1. List of Strains Used in This Study.

strain name genotype source and brief description
Strains Characterized in This Study
IMX1770 MATaura3–52his3–1leu2–3,112MAL2–8cSUC2hxk1::KlLEU2tdh1tdh2gpm2gpm3eno1pyk2pdc5pdc6adh2adh5adh4pyk1pgi1tpi1tdh3pfk2::(pTEF-cas9-tCYC1 natNT1)pgk1gpm1fba1hxk2pfk1adh1pdc1eno2glk1::Sphis5Δ::(pGAL1-I-SceI-tCYC1)can1::(ARS418CAN1 AHFBA1_*AH HTPI1_*HPPGK1_*PQADH1_*QNPYK1_*NOTDH3_*OAENO2_*ABHXK2_*BCPGI1_*CDPFK1_*DJPFK2_*J BPHIS3BP LGPM1_*LMPDC1_*M ARARS1211AR CAN1) sga1::KlURA3 This study; Prototrophic strain with watermarked single locus glycolysis (WMG strain); Derived from IMX1717
IMX1771 MATaura3–52his3–1leu2–3,112MAL2–8cSUC2hxk1::KlLEU2tdh1tdh2gpm2gpm3eno1pyk2pdc5pdc6adh2adh5adh4pyk1pgi1tpi1tdh3pfk2::(pTEF-cas9-tCYC1 natNT1)pgk1gpm1fba1hxk2pfk1adh1pdc1eno2glk1::Sphis5Δ::(pGAL1-I-SceI-tCYC1)can1::(ARS418CAN1 AHFBA1AH HTPI1HPPGK1PQADH1QNPYK1NOTDH3OAENO2ABHXK2BCPGI1CDPFK1DJPFK2J BPHIS3BP LGPM1LMPDC1M ARARS1211AR CAN1)sga1::KlURA3 This study; Prototrophic strain with native single locus glycolysis (NG strain); Derived from IMX1747
IMX2028 MATa ura3–52his3–1leu2–3,112MAL2–8cSUC2hxk1::KlLEU2tdh1tdh2gpm2gpm3eno1pyk2pdc5pdc6adh2adh5adh4glk1::Sphis5Δ::(pGAL1-I SceI-tCYC1)can1::(ARS418CAN1 AHFBA1AH HTPI1HPPGK1PQADH1QNPYK1NOTDH3OAENO2ABHXK2BCPGI1CDPFK1DJPFK2J BPHIS3BP LGPM1LMPDC1M ARARS1211AR CAN1)sga1::(ARS418sga1 AHFBA1_*AH HTPI1_*HPPGK1_*PQADH1_*QNPYK1_*NOTDH3_*OAENO2_*ABHXK2_*BCPGI1_*CDPFK1_*DJPFK2_*J BPHIS3BP LGPM1_*LMPDC1_*M ARARS1211AR sga1) This study; Prototrophic strain with native and watermarked single locus glycolysis (DG strain); Derived from IMX1748
Strains Used As Starting Point or Intermediate in the Construction of the above Strains
CEN.PK113–7D MATaMAL2–8cSUC2 Control strain;46,47 Starting strain for all construction work;13 Contains a SinLoG in Chr. IX, with variable promoter and terminator length; Uracil auxotroph
IMX589 MATaura3–52his3–1leu2–3,112MAL2–8cSUC2glk1::Sphis5hxk1::KlLEU2tdh1tdh2gpm2gpm3eno1pyk2pdc5pdc6adh2adh5adh4sga1::(FBA1GHTPI1HPPGK1PQADH1QNPYK1NOTDH3OAENO2ABHXK2BCPGI1CDPFK1DJPFK2JKAmdSYMKLGPM1LMPDC1-SYNMF)pyk1pgi1tpi1tdh3pfk2::(pTEF-cas9-tCYC1 natNT1)pgk1gpm1fba1hxk2pfk1adh1pdc1eno2  
IMX1338 MATaura3–52his3–1leu2–3,112MAL2–8cSUC2hxk1::KlLEU2tdh1tdh2gpm2gpm3eno1pyk2pdc5pdc6adh2adh5adh4sga1::(FBA1GHTPI1HPPGK1PQADH1QNPYK1NOTDH3OAENO2ABHXK2BCPGI1CDPFK1DJPFK2JKAmdSYMKLGPM1LMPDC1-SYNMF)pyk1pgi1tpi1tdh3pfk2::(pTEF-cas9-tCYC1 natNT1)pgk1gpm1fba1hxk2pfk1adh1pdc1eno2glk1::Sphis5Δ::(pGAL1-ISceI-tCYC1) This study; Derived from IMX589; Contains a SinLoG in Chr. IX; Uracil and histidine auxotroph
IMX1717 MATaura3–52his3–1leu2–3,112MAL2–8cSUC2hxk1::KlLEU2tdh1tdh2gpm2gpm3eno1pyk2pdc5pdc6adh2adh5adh4sga1::(FBA1GHTPI1HPPGK1PQADH1QNPYK1NOTDH3OAENO2ABHXK2BCPGI1CDPFK1DJPFK2JKAmdSYMKLGPM1LMPDC1-SYNMF)pgk1gpm1fba1hxk2pfk1adh1pdc1eno2glk1::Sphis5Δ::(pGAL1-I SceI-tCYC1)can1::(ARS418AHFBA1_*AH.HTPI1_*HPPGK1_*PQADH1_*QNPYK1_*NOTDH3_*OAENO2_*ABHXK2_*BCPGI1_*CDPFK1_*DJPFK2_*J.BPHIS3BP.LGPM1_*LMPDC1_*M.ARARS1211AR) This study; Derived from IMX1338; Strain with native (variable prom and term length) and watermarked SinLoG in Chr. IX and V respectively; Histidine auxotroph
IMX1747 MATaura3–52his3–1leu2–3,112MAL2–8cSUC2hxk1::KlLEU2tdh1tdh2gpm2gpm3eno1pyk2pdc5pdc6adh2adh5adh4 sga1::(FBA1GHTPI1HPPGK1PQADH1QNPYK1NOTDH3OAENO2ABHXK2BCPGI1CDPFK1DJPFK2JKAmdSYMKLGPM1LMPDC1-SYNMF)pyk1pgi1tpi1tdh3pfk2::(pTEF-cas9-tCYC1 natNT1)pgk1gpm1fba1hxk2pfk1adh1pdc1eno2glk1::Sphis5Δ::(pGAL1-I SceI-tCYC1)can1::(pGAL1-I-SceI-tCYC1)can1::(ARS418CAN1 AHFBA1AH HTPI1HPPGK1PQADH1QNPYK1NOTDH3OAENO2ABHXK2BCPGI1CDPFK1DJPFK2J BPHIS3BP LGPM1LMPDC1M ARARS1211AR CAN1) This study; Derived from IMX1338; Strain with native SinLoG with variable prom and term length in Chr. IX and native SinLoG with standardized prom and term length in Chr. V; Histidine auxotroph
IMX1748 MATaura3–52his3–1leu2–3,112MAL2–8cSUC2hxk1::KlLEU2tdh1tdh2gpm2gpm3eno1pyk2pdc5pdc6adh2adh5adh4pyk1pgi1tpi1tdh3pfk2::(pTEF-cas9-tCYC1 natNT1)pgk1gpm1fba1hxk2pfk1adh1pdc1eno2glk1::Sphis5Δ::(pGAL1-I-SceI-tCYC1)can1::(ARS418CAN1 AHFBA1AH HTPI1HPPGK1PQADH1QNPYK1NOTDH3OAENO2ABHXK2BCPGI1CDPFK1DJPFK2J BPHIS3BP LGPM1LMPDC1M ARARS1211AR CAN1) This study; Derived from IMX1771; Strain with watermarked SinLoG in Chr. IX and native SinLoG with standardized prom and term length in Chr. V; Uracil auxotroph