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. 2020 Jun 22;21:414. doi: 10.1186/s12864-020-06803-8

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© The Author(s) 2020

Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.

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Fig. 7 — Single nucleotide polymorphisms (SNPs) are enriched in origins containing regions. (a) SNPs distribution at chromosomes regions in Esmeraldo-like (Green bars) and Non Esmeraldo-like (blue bars) haplotypes genome. Chromossomes sizes were normalized to 1 and SNPs positions were mapped accordingly. (b) Number of SNPs per DGF-1 gene that contains (DGF-1 Ori) or not (DGF-1) origins inside their CDS in Esmerado-like (Green box) and Non Esmeraldo-like (Blue box). Wilcoxon signed-rank test yielded a p-value of 0.0003273 for S haplotype and of 0.0003162 for P haplotype