Table 2.
Gene annotation and arrangement in the mitochondrial genome of Hoplolaimus columbus from South Carolina, USA
| Name | Type | Start | Stop | Length | Start codon | Stop codon | Direction | Anticodon | Intergenic space |
|---|---|---|---|---|---|---|---|---|---|
| cox1 | Protein | 1 | 1536 | 1536 | TTA | TAG | Forward | 116 | |
| atp6 | Protein | 1551 | 2192 | 642 | ATT | TAG | Forward | 14 | |
| nad5 | Protein | 2248 | 3788 | 1541 | TTA | TT | Forward | 55 | |
| trnD | tRNA | 3789 | 3858 | 70 | Forward | GUC | 0 | ||
| nad2 | Protein | 3859 | 4650 | 792 | TTA | TAG | Forward | 0 | |
| trnI | tRNA | 4715 | 4770 | 56 | Forward | GAU | 64 | ||
| cox3 | Protein | 4766 | 5533 | 768 | TTA | TAA | Forward | − 5 | |
| trnF | tRNA | 5941 | 6009 | 69 | Forward | GAA | 407 | ||
| nad4 | Protein | 6232 | 7476 | 1245 | TTG | TAA | Forward | 222 | |
| cob | Protein | 7509 | 8618 | 1110 | ATA | TAG | Forward | 32 | |
| trnP | tRNA | 8619 | 8672 | 54 | Forward | UGG | 0 | ||
| nad6 | Protein | 8673 | 9122 | 450 | TTA | TAA | Forward | 0 | |
| trnG | tRNA | 9123 | 9179 | 57 | Forward | UCC | 0 | ||
| nad4L | Protein | 9182 | 9412 | 231 | TTA | TAG | Forward | 2 | |
| NCR1 | |||||||||
| trnR | tRNA | 17145 | 17074 | 72 | Reverse | UCG | 7661 | ||
| NCR2 | |||||||||
| trnK | tRNA | 20303 | 20371 | 69 | Forward | UUU | 3157 | ||
| rrnS | rRNA | 20720 | 21317 | 598 | Forward | 348 | |||
| trnS2 | tRNA | 21318 | 21380 | 63 | Forward | UGA | 0 | ||
| trnY | tRNA | 21380 | 21435 | 56 | Forward | GUA | -1 | ||
| trnW | tRNA | 21436 | 21496 | 61 | Forward | UCA | 0 | ||
| trnW | tRNA | 21502 | 21561 | 60 | Forward | CCA | 5 | ||
| nad1 | Protein | 21563 | 22422 | 860 | TTA | GT | Forward | 1 | |
| trnQ | tRNA | 22423 | 22472 | 50 | Forward | UUG | 0 | ||
| trnC | tRNA | 22532 | 22604 | 73 | Forward | GCA | 59 | ||
| trnE | tRNA | 22606 | 22661 | 56 | Forward | UUC | 1 | ||
| trnS1 | tRNA | 22714 | 22771 | 58 | Forward | UCU | 52 | ||
| trnL2 | tRNA | 22772 | 22827 | 56 | Forward | UAA | 0 | ||
| trnV | tRNA | 22864 | 22917 | 54 | Forward | UAC | 36 | ||
| trnL1 | tRNA | 23095 | 23150 | 56 | Forward | UAG | 177 | ||
| cox2 | Protein | 23154 | 23823 | 670 | TTA | T | Forward | 3 | |
| trnH | tRNA | 23824 | 23875 | 52 | Forward | GUG | 0 | ||
| rrnL | rRNA | 23876 | 24776 | 901 | Forward | 0 | |||
| nad3 | Protein | 24777 | 25112 | 336 | ATT | TAA | Forward | 0 |