Table 2.
Differentially methylated CpG sites with a nominal p value < 1 × 10−5
| Probe ID | logFC | p-Value | Adj. p value | Nearby gene(s) | Region |
|---|---|---|---|---|---|
| cg07350977 | − 1.60 | 3.04 × 10−7 | 0.07 | CDH9 | TSS200 |
| cg12864235 | − 1.74 | 3.17 × 10−7 | 0.07 | CDH9 | TSS200 |
| cg13593090 | 1.90 | 5.32 × 10−7 | 0.08 | ZNF266 | TSS1500 |
| cg02918054 | 1.30 | 5.14 × 10−6 | 0.47 | SSTR1 | 5’UTR |
| cg12448161 | − 1.60 | 5.51 × 10−6 | 0.47 | COL7A1 | TSS200 |
| cg17744997 | − 1.44 | 7.34 × 10−6 | 0.51 | – | – |
| cg04158018 | − 1.00 | 8.31 × 10−6 | 0.51 | NFE2 | TSS1500 |
CpG sites are ranked in descending order of statistical significance
Probe ID identifier from the Illumina CG database, logFC log fold-change, Adj. p value p value after Benjamini-Hochberg correction for multiple testing, TSS transcription start site, UTR untranslated region