Table 1.
Sequencing results.
| Sample | Total Number of Reads a | Trimmed and Filtered Reads b | Reads Mapped to miRNA (%) c | Accession Number d |
|---|---|---|---|---|
| Fish 1 Day 1 | 10,954,203 | 6,089,270 | 87.9% | SRR9710703 |
| Fish 1 Day 5 | 14,469,109 | 7,317,802 | 95.4% | SRR9710704 |
| Fish 3 Day 1 e | 27,215,751 | 5,019,027 | 76.6% | SRR9710705 |
| Fish 3 Day 5 | 19,158,159 | 6,104,257 | 88.3% | SRR9710706 |
| Fish 4 Day 1 | 29,288,867 | 5,521,671 | 77.6% | SRR9710709 |
| Fish 4 Day 5 | 26,403,552 | 6,365,057 | 81.9% | SRR9710710 |
| Fish 5 Day 1 | 10,711,291 | 6,013,861 | 78.8% | SRR9710711 |
| Fish 5 Day 5 | 8,325,813 | 4,870,035 | 79.6% | SRR9710712 |
| Fish 6 Day 1 | 10,064,941 | 5,282,051 | 80.5% | SRR9710707 |
| Fish 6 Day 5 | 8,760,222 | 6,032,420 | 87.1% | SRR9710708 |
a Total number of reads in raw fastq file. b Total number of reads after removing adaptors and filtering reads by size. c Reads mapped to reference index (known miRNAs of Atlantic salmon) [39]. d Accession number of sequencing results for each sample submitted to NCBI Sequence Read Archive (SRA) database. e See Materials and Methods (Section 4.6) for an explanation for the exclusion of Fish 2.